- Scientific Name
- Olea europaea
- Common Names
- common olive; Olea sativa
- Bioproject
- PRJCA015700
- Biosample
- SAMC3965997
- Accession No.
- GWHEUUU00000000.1
- GWH reannotation accession
- -
- GSA raw reads
- -
- GVM variations of the species
- -
- Submitter Organization
- College of Ecology, Lanzhou University
- Contact
- Dongshi Wan(wandsh@lzu.edu.cn)
- Sequence author(s)
- Jiaojiao lv
- Released Date
- 2024-07-17
- Assembly Level
- Complete genome
- Genome Representation
- Full Genome
- Assembly method
- Hifiasm 45475
- Sequencing & coverage
- PacBio 35.6
ONT utra-long 30.5
HiC 54.2 - Download
- DNA GFF RNA CDS Protein
- Reannotation Download
- -
- Publication(s)
- Jiaojiao lv. The gapless genome assembly and multi-omics analyses unveil a pivotal regulatory mechanism of oil biosynthesis in the olive tree. Horticulture Research. 2024.
Statistics of Genome Assembly
| Genome size (bp) | 1,277,104,531 |
| GC content | 35.90% |
| Chromosomes sequence No. | 23 |
Annotation of Whole Genome Assembly
| Protein | Total | |
|---|---|---|
| Chromosome | 69,398 | 69,398 |
| Total | 69,398 | 69,398 |
Annotation Details
| ChrID | Protein | Total |
|---|---|---|
| chr1 | 5,138 | 5,138 |
| chr10 | 3,179 | 3,179 |
| chr11 | 2,581 | 2,581 |
| chr12 | 2,945 | 2,945 |
| chr13 | 2,622 | 2,622 |
| chr14 | 2,944 | 2,944 |
| chr15 | 2,479 | 2,479 |
| chr16 | 2,629 | 2,629 |
| chr17 | 2,275 | 2,275 |
| chr18 | 2,723 | 2,723 |
| chr19 | 2,590 | 2,590 |
| chr2 | 3,851 | 3,851 |
| chr20 | 2,538 | 2,538 |
| chr21 | 2,406 | 2,406 |
| chr22 | 2,082 | 2,082 |
| chr23 | 2,248 | 2,248 |
| chr3 | 3,775 | 3,775 |
| chr4 | 3,356 | 3,356 |
| chr5 | 4,184 | 4,184 |
| chr6 | 3,051 | 3,051 |
| chr7 | 3,272 | 3,272 |
| chr8 | 3,535 | 3,535 |
| chr9 | 2,995 | 2,995 |
| Total | 69,398 | 69,398 |