- Scientific Name
- Sus scrofa domesticus
- Common Names
- domestic pig; Sus domestica, Sus domesticus, Sus scrofa domestica
- Bioproject
- PRJCA025149
- Biosample
- SAMC4018407
- Accession No.
- GWHEUVB00000000.1
- GWH reannotation accession
- -
- GSA raw reads
- CRR1232679
- GVM variations of the species
- -
- Submitter Organization
- College of Veterinary Medicine, Yunnan Agricultural University
- Contact
- HongJiang Wei, hongjiangwei@126.com
- Sequence author(s)
- HongJiang Wei
- Released Date
- 2024-09-13
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Assembly method
- Hifiasm v0.16.1-r375
YaHS v1.2a.1
RaGoo v1.1 - Sequencing & coverage
- PacBio Sequel II 36.8
Illumina NovaSeq 6000 56.8 - Download
- DNA
- Reannotation Download
- -
- Publication(s)
- Hongman Chen, et al. A chromosome-scale reference genome of the Banna miniature inbred pig. Scientific data. 2024, 11(1): 1345.
| Assembly Accession | GWH Reannotation Accession | Assembly Name | Assembly Level | Released Date | Download Files |
|---|---|---|---|---|---|
| GWHEUVB00000000.1 | - | Banna_mininature_inbred_pig | Draft genome in chromosome level | 2024-09-13 |
DNA
|
Statistics of Genome Assembly
| Genome size (bp) | 2,656,541,109 |
| GC content | 42.57% |
| Organellas sequence No. | 1 |
| Genome sequence No. | 44 |
| Maximum genome sequence length (bp) | 292,929,415 |
| Minimum genome sequence length (bp) | 2,286 |
| Average genome sequence length (bp) | 60,375,934 |
| Genome sequence N50 (bp) | 143,604,440 |
| Genome sequence N90 (bp) | 70,117,247 |