- Scientific Name
- Mylopharyngodon piceus
- Common Names
- black carp; Ctenopharyngodon piceus, Leuciscus piceus
- Bioproject
- PRJCA028801
- Biosample
- SAMC4057508
- Accession No.
- GWHEYLR00000000.1
- GWH reannotation accession
- -
- GSA raw reads
- -
- GVM variations of the species
- -
- Submitter Organization
- College of Life Science, Hunan Normal University
- Contact
- Yong Zeng(yongz@hunnu.edu.cn), Hao Feng(fenghao@hunnu.edu.cn)
- Sequence author(s)
- Jun Xiao, Mengtuo Li, Jun Yan, Lingxiang Wang, Ji Liu, Hui Wu, Jun Xiao, Yong Zeng, Hao Feng
- Released Date
- 2025-01-09
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Assembly method
- HiFiasm v 0.16.1-r375
Juicer v1.5.6
3D-DNA v180922 - Sequencing & coverage
- Pacbio HiFi sequencing 76
Hi-C library sequencing 300.58 - Download
- DNA
- Reannotation Download
- -
- Publication(s)
- -
| Assembly Accession | GWH Reannotation Accession | Assembly Name | Assembly Level | Released Date | Download Files |
|---|---|---|---|---|---|
| GWHEYLR00000000.1 | - | Tgbc | Draft genome in chromosome level | 2025-01-09 |
DNA
|
Statistics of Genome Assembly
| Genome size (bp) | 883,329,677 |
| GC content | 37.60% |
| Chromosomes sequence No. | 24 |
| Genome sequence No. | 47 |
| Maximum genome sequence length (bp) | 50,986,568 |
| Minimum genome sequence length (bp) | 6,011 |
| Average genome sequence length (bp) | 18,794,248 |
| Genome sequence N50 (bp) | 35,601,617 |
| Genome sequence N90 (bp) | 30,523,885 |