- Scientific Name
- Campeiostachys nutans
- Common Names
- Elymus nutans
- Bioproject
- PRJCA028418
- Biosample
- SAMC4037030
- Accession No.
- GWHFAJN00000000.1
- GWH reannotation accession
- -
- GSA raw reads
- -
- GVM variations of the species
- -
- Submitter Organization
- Grass Plants Research Institute, Sichuan Academy of Grassland Sciences
- Contact
- Dan Chang(425070047@qq.com)
- Sequence author(s)
- Qie Bai, Xu Li, Dan Chang, Gang Xie
- Released Date
- 2024-12-01
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Assembly method
- wtdbg2 2.5
- Sequencing & coverage
- Nanopore 133
- Download
- DNA GFF RNA CDS Protein
- Reannotation Download
- -
- Publication(s)
- Dan Chang, et al. A reference genome assembly of the alpine forage grass Elymus nutans. Plant Biotechnology Journal. 2025, 23(9): 3900-3902.
Statistics of Genome Assembly
| Genome size (bp) | 9,458,615,163 |
| GC content | 46.23% |
| Chromosomes sequence No. | 21 |
| Genome sequence No. | 10,739 |
| Maximum genome sequence length (bp) | 537,024,957 |
| Minimum genome sequence length (bp) | 1,084 |
| Average genome sequence length (bp) | 880,772 |
| Genome sequence N50 (bp) | 424,536,636 |
| Genome sequence N90 (bp) | 346,229,304 |
Annotation of Whole Genome Assembly
| Protein | Total | |
|---|---|---|
| Chromosome | 107,328 | 107,328 |
| Others | 6,483 | 6,483 |
| Total | 113,811 | 113,811 |
Annotation Details
| ChrID | Protein | Total |
|---|---|---|
| chrH01 | 4,719 | 4,719 |
| chrH02 | 6,184 | 6,184 |
| chrH03 | 5,494 | 5,494 |
| chrH04 | 4,799 | 4,799 |
| chrH05 | 5,617 | 5,617 |
| chrH06 | 4,535 | 4,535 |
| chrH07 | 5,848 | 5,848 |
| chrS01 | 4,794 | 4,794 |
| chrS02 | 6,779 | 6,779 |
| chrS03 | 5,822 | 5,822 |
| chrS04 | 3,905 | 3,905 |
| chrS05 | 5,926 | 5,926 |
| chrS06 | 5,025 | 5,025 |
| chrS07 | 6,008 | 6,008 |
| chrY01 | 4,107 | 4,107 |
| chrY02 | 5,522 | 5,522 |
| chrY03 | 4,313 | 4,313 |
| chrY04 | 3,580 | 3,580 |
| chrY05 | 5,238 | 5,238 |
| chrY06 | 4,009 | 4,009 |
| chrY07 | 5,104 | 5,104 |
| Others | 6,483 | 6,483 |
| Total | 113,811 | 113,811 |