- Scientific Name
- Lepus capensis
- Common Names
- Cape hare; brown hare;
- Bioproject
- PRJCA028335
- Biosample
- SAMC4045587
- Accession No.
- GWHFCZH00000000.1
- GWH reannotation accession
- -
- GSA raw reads
- CRR1245679, CRR1245678
- GVM variations of the species
- -
- Submitter Organization
- College of Animal Science and Technology, Northwest A&F University
- Contact
- Xianggui Dong, xgdong@nwafu.edu.cn
- Sequence author(s)
- Xianggui Dong, Yu Liu, Yuanyuan Zhang
- Released Date
- 2024-08-23
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Assembly method
- Hifiasm v0.19.9-r616
3d-DNA 2017 - Sequencing & coverage
- Pacbio 35
Illumina NovaSeq 6000 100 - Download
- DNA
- Publication(s)
- Xianggui Dong, et al. A chromosome-level genome assembly of Cape hare (Lepus capensis). Scientific data. 2024, 11(1): 1081.
| Assembly Accession | GWH Reannotation Accession | Assembly Name | Assembly Level | Released Date | Download Files |
|---|---|---|---|---|---|
| GWHFCZH00000000.1 | - | Lepus_capensis_v1 | Draft genome in scaffold level | 2024-08-23 |
DNA
|
Statistics of Genome Assembly
| Genome size (bp) | 2,961,179,943 |
| GC content | 44.18% |
| Chromosomes sequence No. | 1 |
| Genome sequence No. | 927 |
| Maximum genome sequence length (bp) | 185,462,270 |
| Minimum genome sequence length (bp) | 1,000 |
| Average genome sequence length (bp) | 3,194,369 |
| Genome sequence N50 (bp) | 124,437,717 |
| Genome sequence N90 (bp) | 8,571,000 |