- Scientific Name
- Pterocarya stenoptera
- Common Names
- -
- Bioproject
- PRJCA030985
- Biosample
- SAMC4238474
- Accession No.
- GWHFGFO00000000.1
- GWH reannotation accession
- -
- GSA raw reads
- -
- GVM variations of the species
- -
- Submitter Organization
- College of Life Sciences, Northwest University
- Contact
- Peng Zhao, pengzhao@nwu.edu.cn
- Sequence author(s)
- Peng Zhao
- Released Date
- 2024-10-17
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Assembly method
- SOAPDENOVO v1.2
Hifiasm 0.16.1
pilon 1.22
Racon 1.3.1
Arrow Smartlink8.0
Nextpolish 1.3.1
Bionano Solve 3.5
LACHESIS 201701
ALLHIC 0.9.8 - Sequencing & coverage
- Illumina HiSeq 60
PacBio 35
Hi-C 102 - Download
- DNA
- Publication(s)
- -
| Assembly Accession | GWH Reannotation Accession | Assembly Name | Assembly Level | Released Date | Download Files |
|---|---|---|---|---|---|
| GWHFGFO00000000.1 | - | P.st | Draft genome in chromosome level | 2024-10-17 |
DNA
|
Statistics of Genome Assembly
| Genome size (bp) | 555,202,549 |
| GC content | 36.65% |
| Chromosomes sequence No. | 16 |
| Genome sequence No. | 162 |
| Maximum genome sequence length (bp) | 51,457,875 |
| Minimum genome sequence length (bp) | 18,971 |
| Average genome sequence length (bp) | 3,427,176 |
| Genome sequence N50 (bp) | 35,629,775 |
| Genome sequence N90 (bp) | 22,855,037 |