Scientific Name
Populus lasiocarpa
Common Names
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Bioproject
PRJCA025709
Biosample
SAMC3564403
Accession No.
GWHFIFJ00000000.1
GWH reannotation accession
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GSA raw reads
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GVM variations of the species
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Submitter Organization
Nanjing Forestry University, Nanjing Forestry University
Contact
Yangfan Feng(yangfanfeng@njfu.edu.cn)
Sequence author(s)
Yangfan Feng
Released Date
2026-06-10
Assembly Level
Draft genome in chromosome level
Genome Representation
Full Genome
Assembly method
Hifiasm v0.13-r307
Sequencing & coverage
Pacbio 67
Illumina 95
Download
DNA GFF RNA CDS Protein
Reannotation Download
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Publication(s)
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Assembly Accession GWH Reannotation Accession Assembly Name Assembly Level Released Date Download Files
GWHFIFJ00000000.1 - Plasiocarpa_M Draft genome in chromosome level 2026-06-10 DNA GFF RNA CDS Protein

Statistics of Genome Assembly

Genome size (bp) 452,439,430
GC content 34.66%
Chromosomes sequence No. 16
Genome sequence No. 30
Maximum genome sequence length (bp) 51,762,333
Minimum genome sequence length (bp) 20,244
Average genome sequence length (bp) 15,081,314
Genome sequence N50 (bp) 23,353,628
Genome sequence N90 (bp) 17,100,121
Annotation of Whole Genome Assembly
Protein Total
Chromosome 30,406 30,406
Others 5,915 5,915
Total 36,321 36,321
Annotation Details
ChrID Protein Total
chr1 4,273 4,273
chr10 2,318 2,318
chr11 1,362 1,362
chr12 1,352 1,352
chr13 1,385 1,385
chr15 1,332 1,332
chr16 1,272 1,272
chr17 1,332 1,332
chr18 1,298 1,298
chr2 2,526 2,526
chr3 2,230 2,230
chr4 2,179 2,179
chr5 2,293 2,293
chr6 2,593 2,593
chr7 1,425 1,425
chrY 1,236 1,236
Others 5,915 5,915
Total 36,321 36,321