- Scientific Name
- Pistacia vera
- Common Names
- pistachio;
- Bioproject
- PRJCA002678
- Biosample
- SAMC185305
- Accession No.
- GWHAMJZ00000000
- GWH reannotation accession
- -
- GSA raw reads
- -
- GVM variations of the species
- -
- Submitter Organization
- Haixia Institute of Science and Technology, Fujian Agriculture and Forestry University
- Contact
- Ray Ming(rayming@illinois.edu)
- Sequence author(s)
- Salih Kafkas
- Released Date
- 2024-05-11
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Assembly method
- CANU 1.6
- Sequencing & coverage
- PacBio RSII 90.0
- Download
- DNA GFF RNA CDS Protein
- Reannotation Download
- -
- Publication(s)
- -
Statistics of Genome Assembly
| Genome size (bp) | 623,358,307 |
| GC content | 36.02% |
| Genome sequence No. | 28 |
| Maximum genome sequence length (bp) | 62,820,281 |
| Minimum genome sequence length (bp) | 1,210 |
| Average genome sequence length (bp) | 22,262,797 |
| Genome sequence N50 (bp) | 39,797,145 |
| Genome sequence N90 (bp) | 32,774,349 |
Annotation of Whole Genome Assembly
| Protein | Total | |
|---|---|---|
| Total | 29,971 | 29,971 |