Scientific Name
Oryza australiensis
Common Names
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Bioproject
PRJCA030604
Biosample
SAMC4157829
Accession No.
GWHFIGT00000000.1
GWH reannotation accession
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GSA raw reads
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GVM variations of the species
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Submitter Organization
Queensland Alliance for Agriculture and Food Innovation, Queensland Alliance for Agriculture and Food Innovation, The University of Queensland
Contact
Robert Henry(robert.henry@uq.edu.au)
Sequence author(s)
Sabrina Morrison
Released Date
2025-03-31
Assembly Level
Draft genome in chromosome level
Genome Representation
Full Genome
Assembly method
Hifiasm v0.19.4
Sequencing & coverage
PacBio 80
Download
DNA GFF RNA CDS Protein
Reannotation Download
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Publication(s)
Sabrina Morrison, et al. The Oryza australiensis genome reveals potential as a source of genes for rice improvement. Scientific Reports. 2025, 15(1): 27826.
Assembly Accession GWH Reannotation Accession Assembly Name Assembly Level Released Date Download Files
GWHFIGT00000000.1 - Oryza_australiensis_collapsed_assembly Draft genome in chromosome level 2025-03-31 DNA GFF RNA CDS Protein

Statistics of Genome Assembly

Genome size (bp) 908,685,645
GC content 45.00%
Chromosomes sequence No. 11
Genome sequence No. 13
Maximum genome sequence length (bp) 99,334,057
Minimum genome sequence length (bp) 3,672,952
Average genome sequence length (bp) 69,898,896
Genome sequence N50 (bp) 76,570,987
Genome sequence N90 (bp) 61,684,835
Annotation of Whole Genome Assembly
Protein Total
Chromosome 25,083 25,083
Others 1,434 1,434
Total 26,517 26,517
Annotation Details
ChrID Protein Total
chr1 4,009 4,009
chr10 1,364 1,364
chr11 1,373 1,373
chr12 1,347 1,347
chr2 3,100 3,100
chr3 3,614 3,614
chr4 2,330 2,330
chr5 2,203 2,203
chr6 2,121 2,121
chr7 1,920 1,920
chr8 1,702 1,702
Others 1,434 1,434
Total 26,517 26,517