Scientific Name
Populus lasiocarpa
Common Names
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Bioproject
PRJCA025709
Biosample
SAMC3564404
Accession No.
GWHFIIK00000000.1
GWH reannotation accession
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GSA raw reads
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GVM variations of the species
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Submitter Organization
Nanjing Forestry University, Nanjing Forestry University
Contact
Yangfan Feng(yangfanfeng@njfu.edu.cn)
Sequence author(s)
Yangfan Feng
Released Date
2026-06-10
Assembly Level
Draft genome in chromosome level
Genome Representation
Full Genome
Assembly method
Hifiasm v0.13-r307
Sequencing & coverage
Pacbio 50
Illumina 86
Download
DNA GFF RNA CDS Protein
Reannotation Download
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Publication(s)
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Assembly Accession GWH Reannotation Accession Assembly Name Assembly Level Released Date Download Files
GWHFIIK00000000.1 - Plasiocarpa_F Draft genome in chromosome level 2026-06-10 DNA GFF RNA CDS Protein

Statistics of Genome Assembly

Genome size (bp) 452,405,796
GC content 34.54%
Chromosomes sequence No. 16
Genome sequence No. 29
Maximum genome sequence length (bp) 52,918,780
Minimum genome sequence length (bp) 45,338
Average genome sequence length (bp) 15,600,200
Genome sequence N50 (bp) 23,015,565
Genome sequence N90 (bp) 16,786,097
Annotation of Whole Genome Assembly
Protein Total
Chromosome 30,657 30,657
Others 5,759 5,759
Total 36,416 36,416
Annotation Details
ChrID Protein Total
chr1 4,337 4,337
chr10 2,323 2,323
chr11 1,426 1,426
chr12 1,340 1,340
chr13 1,357 1,357
chr15 1,365 1,365
chr16 1,302 1,302
chr17 1,331 1,331
chr18 1,345 1,345
chr2 2,539 2,539
chr3 2,205 2,205
chr4 2,171 2,171
chr5 2,315 2,315
chr6 2,596 2,596
chr7 1,430 1,430
chrX 1,275 1,275
Others 5,759 5,759
Total 36,416 36,416