- Scientific Name
- Phaseolus vulgaris
- Common Names
- French bean, kidney bean, string bean;
- Bioproject
- PRJCA034344
- Biosample
- SAMC4512764
- Accession No.
- GWHFIIS00000000.1
- GWH reannotation accession
- -
- GSA raw reads
- CRR1441839
- GVM variations of the species
- 13,876,210 (SNP), 3,707,970 (Indel)
- Submitter Organization
- Shanxi Hou Ji Laboratory, Shanxi Agricultural University
- Contact
- Bo Zhao(bozhao2022@sxau.edu.cn)
- Sequence author(s)
- Bo Zhao
- Released Date
- 2025-02-28
- Assembly Level
- Complete genome
- Genome Representation
- Full Genome
- Assembly method
- hifiasm v0.19.7-r598
- Sequencing & coverage
- PacBio HiFi 147
Nanopore ultra-long 110
DNBSEQ-T7 73 - Download
- DNA GFF RNA CDS Protein
- Reannotation Download
- -
- Publication(s)
- -
Statistics of Genome Assembly
| Genome size (bp) | 560,605,324 |
| GC content | 35.93% |
| Chromosomes sequence No. | 11 |
Annotation of Whole Genome Assembly
| Protein | Total | |
|---|---|---|
| Chromosome | 28,064 | 28,064 |
| Total | 28,064 | 28,064 |
Annotation Details
| ChrID | Protein | Total |
|---|---|---|
| chr1 | 3,076 | 3,076 |
| chr10 | 1,467 | 1,467 |
| chr11 | 2,756 | 2,756 |
| chr2 | 3,222 | 3,222 |
| chr3 | 3,735 | 3,735 |
| chr4 | 1,637 | 1,637 |
| chr5 | 1,796 | 1,796 |
| chr6 | 2,175 | 2,175 |
| chr7 | 2,649 | 2,649 |
| chr8 | 2,717 | 2,717 |
| chr9 | 2,834 | 2,834 |
| Total | 28,064 | 28,064 |