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  • Populus davidiana
  • PdaFemale_genome
    • Scientific Name
    Populus davidiana
    Common Names
    Populus tremula var. davidiana
    Bioproject
    PRJCA033375
    Biosample
    SAMC4441714
    Accession No.
    GWHFILA00000000.1
    GWH reannotation accession
    -
    GSA raw reads
    -
    GVM variations of the species
    -
    Submitter Organization
    Nanjing Forestry University, Nanjing Forestry University
    Contact
    liangjiao xue(lxue@njfu.edu.cn)
    Sequence author(s)
    chengjin wen
    Released Date
    2026-06-10
    Assembly Level
    Draft genome in chromosome level
    Genome Representation
    Full Genome
    Assembly method
    CANU v1.8
    Pilon v1.23
    Purge-dups v1.2.5
    RaGOO v1.11
    Sequencing & coverage
    PacBio 310
    Download
    DNA GFF RNA CDS Protein
    Reannotation Download
    -
    Publication(s)
    -
    Assembly Accession GWH Reannotation Accession Assembly Name Assembly Level Released Date Download Files
    GWHFILA00000000.1 - PdaFemale_genome Draft genome in chromosome level 2026-06-10 DNA GFF RNA CDS Protein

    Statistics of Genome Assembly

    Genome size (bp) 407,874,660
    GC content 34.30%
    Chromosomes sequence No. 3
    Genome sequence No. 192
    Maximum genome sequence length (bp) 56,052,636
    Minimum genome sequence length (bp) 1,682
    Average genome sequence length (bp) 2,124,347
    Genome sequence N50 (bp) 20,538,081
    Genome sequence N90 (bp) 13,325,745
    Annotation of Whole Genome Assembly
    Protein Total
    Chromosome 6,995 6,995
    Others 28,428 28,428
    Total 35,423 35,423
    Annotation Details
    ChrID Protein Total
    chr1 4,333 4,333
    chr11 1,432 1,432
    chr16 1,230 1,230
    Others 28,428 28,428
    Total 35,423 35,423