- Scientific Name
- Rhipicephalus microplus
- Common Names
- cattle tick; southern cattle tick; Boophilus microplus, Rhipicephalus (Boophilus) microplus
- Bioproject
- PRJCA002240
- Biosample
- SAMC136624
- Accession No.
- GWHAMMG00000000
- GWH reannotation accession
- -
- GSA raw reads
- -
- GVM variations of the species
- -
- Submitter Organization
- State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology, Academy of Military Medical Sciences
- Contact
- TIGMIC Group(tigmicgroup@gmail.com)
- Sequence author(s)
- TIGMIC Group
- Released Date
- 2020-10-04
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Assembly method
- Canu;Falcon;Wtdbg;Smartdenovo V1.7;V1.0;V1.1.006;V1.0
- Sequencing & coverage
- Illumina HiSeqX-Ten 110.2
PacBio 67.4 - Download
- DNA GFF RNA CDS Protein
- Reannotation Download
- -
- Publication(s)
- -
Statistics of Genome Assembly
| Genome size (bp) | 2,529,930,717 |
| GC content | 45.79% |
| Organellas sequence No. | 1 |
| Genome sequence No. | 7,048 |
| Maximum genome sequence length (bp) | 325,144,201 |
| Minimum genome sequence length (bp) | 1,660 |
| Average genome sequence length (bp) | 358,957 |
| Genome sequence N50 (bp) | 183,350,851 |
| Genome sequence N90 (bp) | 99,216 |
Annotation of Whole Genome Assembly
| Protein | Total | |
|---|---|---|
| Total | 29,857 | 29,857 |