- Scientific Name
- Insomniella plumaeforme
- Common Names
- Hypnum plumiforme Wilson, 1848, Insomniella plumiforme
- Bioproject
- PRJCA001833
- Biosample
- SAMC111318
- Accession No.
- GWHAMMO00000000
- GWH reannotation accession
- -
- GSA raw reads
- CRR084247
- GVM variations of the species
- -
- Submitter Organization
- Department of Agronomy, Zhejiang University
- Contact
- Longjiang Fan, fanlj@zju.edu.cn
- Sequence author(s)
- Lingfeng Mao
- Released Date
- 2020-06-03
- Assembly Level
- Draft genome in scaffold level
- Genome Representation
- Partial Genome ( Nuclear )
- Assembly method
- MaSuRCA 3.2.2
- Sequencing & coverage
- Illumina HiSeq 4000 203.0
PacBio 3.5 - Download
- DNA GFF RNA CDS Protein
- Publication(s)
- Lingfeng Mao, et al. Genomic evidence for convergent evolution of gene clusters for momilactone biosynthesis in land plants. PNAS. 2020, 117(22): 12472-12480.
Statistics of Genome Assembly
| Genome size (bp) | 334,996,873 |
| GC content | 35.51% |
| Scaffold sequence No. | 1,035 |
| Maximum scaffold sequence length (bp) | 3,382,264 |
| Minimum scaffold sequence length (bp) | 216 |
| Average scaffold sequence length (bp) | 323,668 |
| Scaffold N50 (bp) | 790,020 |
| Scaffold N90 (bp) | 241,570 |
Annotation of Whole Genome Assembly
| Protein | Total | |
|---|---|---|
| Total | 30,237 | 30,237 |