- Scientific Name
- Nitrosopumilaceae archaeon
- Common Names
- -
- Bioproject
- PRJCA035250
- Biosample
- SAMC4662274
- Accession No.
- GWHFOOJ00000000.1
- GWH reannotation accession
- -
- GSA raw reads
- -
- GVM variations of the species
- -
- Submitter Organization
- School of marine science, Sun Yat-sen University
- Contact
- Wei Xie(xiewei9@mail.sysu.edu.cn)
- Sequence author(s)
- Liping Qu
- Released Date
- 2025-07-08
- Assembly Level
- Draft genome in scaffold level
- Genome Representation
- Full Genome
- Assembly method
- metaSPAdes v3.15.5
megahit v1.2.9 - Sequencing & coverage
- DNBSEQ-T7 2.28
- Download
- DNA
- Reannotation Download
- -
- Publication(s)
- -
| Assembly Accession | GWH Reannotation Accession | Assembly Name | Assembly Level | Released Date | Download Files |
|---|---|---|---|---|---|
| GWHFOOJ00000000.1 | - | SY80_MAG_3 | Draft genome in scaffold level | 2025-07-08 |
DNA
|
Statistics of Genome Assembly
| Genome size (bp) | 847,828 |
| GC content | 33.65% |
| Scaffold sequence No. | 106 |
| Maximum scaffold sequence length (bp) | 28,411 |
| Minimum scaffold sequence length (bp) | 2,328 |
| Average scaffold sequence length (bp) | 7,998 |
| Scaffold N50 (bp) | 9,910 |
| Scaffold N90 (bp) | 4,321 |