- Scientific Name
- Sus scrofa
- Common Names
- pigs, swine, wild boar; pig;
- Bioproject
- PRJCA032164
- Biosample
- SAMC4322720
- Accession No.
- GWHFPUN00000000.1
- GWH reannotation accession
- -
- GSA raw reads
- -
- GVM variations of the species
- 90,901,492 (SNP), 12,087,428 (Indel)
- Submitter Organization
- Institute of Animal Sciences, Chinese Academy of Agricultural Sciences (CASA)
- Contact
- Wencheng Zong, zongzone@outlook.com
- Sequence author(s)
- Wencheng Zong
- Released Date
- 2025-02-21
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Assembly method
- HiFisam v0.18.7
- Sequencing & coverage
- PacBio Sequel IIe 40
PromenthION 140
Illumina Novaseq 6000 100 - Download
- DNA
- Publication(s)
- Wencheng Zong, et al. Two telomere-to-telomere pig genome assemblies and pan-genome analyses provide insights into genomic structural landscape and genetic adaptations. iMeta. 2025.
| Assembly Accession | GWH Reannotation Accession | Assembly Name | Assembly Level | Released Date | Download Files |
|---|---|---|---|---|---|
| GWHFPUN00000000.1 | - | T2T_Mpig1.0 | Draft genome in chromosome level | 2025-02-21 |
DNA
|
Statistics of Genome Assembly
| Genome size (bp) | 2,662,046,317 |
| GC content | 42.63% |
| Chromosomes sequence No. | 19 |
| Genome sequence No. | 143 |
| Maximum genome sequence length (bp) | 289,878,295 |
| Minimum genome sequence length (bp) | 541 |
| Average genome sequence length (bp) | 18,615,709 |
| Genome sequence N50 (bp) | 143,374,465 |
| Genome sequence N90 (bp) | 85,530,007 |