- Scientific Name
- Mycobacterium tuberculosis
- Common Names
- Bacillus tuberculosis, Bacterium tuberculosis, Mycobacterium tuberculosis typus humanus, Mycobacterium tuberculosis var. hominis, Mycobacterium tuberculosis variant tuberculosis
- Bioproject
- PRJCA036393
- Biosample
- SAMC4767635
- Accession No.
- GWHFQBJ00000000.1
- GWH reannotation accession
- GWHRA_FQBJ00000000.1
- GSA raw reads
- -
- GVM variations of the species
- -
- Submitter Organization
- Laboratory, Ganzhou Center for Disease Control and Prevention
- Contact
- Baisheng Li(libsn@126.com)
- Sequence author(s)
- Juexin Wang
- Released Date
- 2025-03-01
- Assembly Level
- Draft genome in scaffold level
- Genome Representation
- Full Genome
- Assembly method
- MGAP_Assembly v2.0
- Sequencing & coverage
- MGISEQ-200 603.97
- Download
- DNA
- Reannotation Download
- Reannotation DNA Reannotation GFF Reannotation RNA Reannotation CDS Reannotation Protein
- Publication(s)
- Juexin Wang, et al. Whole-genome sequencing for analyzing the transmission characteristics of drug-resistant Mycobacterium tuberculosis in Ganzhou, China. BMC Infectious Diseases. 2025, 25(1): 950-961.
| Assembly Accession | GWH Reannotation Accession | Assembly Name | Assembly Level | Released Date | Download Files |
|---|---|---|---|---|---|
| GWHFQBJ00000000.1 | GWHRA_FQBJ00000000.1 | king_14 | Draft genome in scaffold level | 2025-03-01 |
DNA
Reannotation DNA Reannotation GFF Reannotation RNA Reannotation CDS Reannotation Protein |
Statistics of Genome Assembly
| Genome size (bp) | 4,362,380 |
| GC content | 65.59% |
| Scaffold sequence No. | 110 |
| Maximum scaffold sequence length (bp) | 231,605 |
| Minimum scaffold sequence length (bp) | 500 |
| Average scaffold sequence length (bp) | 39,658 |
| Scaffold N50 (bp) | 108,555 |
| Scaffold N90 (bp) | 35,393 |
Statistics of Genome Assembly
| Genome size (bp) | 4,362,380 |
| GC content | 65.59% |
| Scaffold sequence No. | 110 |
| Maximum scaffold sequence length (bp) | 231,605 |
| Minimum scaffold sequence length (bp) | 500 |
| Average scaffold sequence length (bp) | 39,658 |
| Scaffold N50 (bp) | 108,555 |
| Scaffold N90 (bp) | 35,393 |
Annotation of Whole Genome Assembly
| Protein | tRNA | rRNA | Pseudogene | Others | Total | |
|---|---|---|---|---|---|---|
| Total | 3,945 | 45 | 3 | 184 | 124 | 4,301 |