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  • Rosa rugosa
  • HX_hap1
    • Scientific Name
    Rosa rugosa
    Common Names
    Japanese rose, Turkestan rose;
    Bioproject
    PRJCA016023
    Biosample
    SAMC4891361
    Accession No.
    GWHFSQG00000000.1
    GWH reannotation accession
    -
    GSA raw reads
    -
    GVM variations of the species
    -
    Submitter Organization
    Institute of Grassland, Flowers and Ecology, Beijing Engineering Research Center of Functional Floriculture
    Contact
    Xi Cheng(chengxiswzx@163.com)
    Sequence author(s)
    Xi Cheng
    Released Date
    2025-12-31
    Assembly Level
    Draft genome in chromosome level
    Genome Representation
    Full Genome
    Assembly method
    hifiasm 0.16.1
    Sequencing & coverage
    Pacbio hifi 37.71
    Download
    DNA GFF RNA CDS Protein
    Reannotation Download
    -
    Publication(s)
    -
    Assembly Accession GWH Reannotation Accession Assembly Name Assembly Level Released Date Download Files
    GWHFSQG00000000.1 - HX_hap1 Draft genome in chromosome level 2025-12-31 DNA GFF RNA CDS Protein

    Statistics of Genome Assembly

    Genome size (bp) 453,634,036
    GC content 39.53%
    Chromosomes sequence No. 7
    Genome sequence No. 172
    Maximum genome sequence length (bp) 80,139,238
    Minimum genome sequence length (bp) 14,869
    Average genome sequence length (bp) 2,637,407
    Genome sequence N50 (bp) 60,561,114
    Genome sequence N90 (bp) 44,516,939
    Annotation of Whole Genome Assembly
    Protein Total
    Chromosome 33,706 33,706
    Others 3,112 3,112
    Total 36,818 36,818
    Annotation Details
    ChrID Protein Total
    chr1 4,277 4,277
    chr2 4,920 4,920
    chr3 4,269 4,269
    chr4 3,804 3,804
    chr5 5,595 5,595
    chr6 6,162 6,162
    chr7 4,679 4,679
    Others 3,112 3,112
    Total 36,818 36,818