- Scientific Name
- Phytophthora capsici
- Common Names
- -
- Bioproject
- PRJCA039031
- Biosample
- SAMC5007962
- Accession No.
- GWHFSSF00000000.1
- GWH reannotation accession
- -
- GSA raw reads
- CRR1769045
- GVM variations of the species
- -
- Submitter Organization
- Laboratory of Plant-Microbe Interactions, Peking University Institute of Advanced Agricultural Sciences
- Contact
- Yuan Chen, yuan.chen@pku-iaas.edu.cn
- Sequence author(s)
- Yuan Chen
- Released Date
- 2025-10-27
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Assembly method
- HiFiasm v0.19.9-r616
- Sequencing & coverage
- PacBio Revio 78.75
Oxford Nanopore 91.89
Illumina NovaSeq 121 - Download
- DNA
- Publication(s)
- -
| Assembly Accession | GWH Reannotation Accession | Assembly Name | Assembly Level | Released Date | Download Files |
|---|---|---|---|---|---|
| GWHFSSF00000000.1 | - | Phyca_bya5 | Draft genome in chromosome level | 2025-10-27 |
DNA
|
Statistics of Genome Assembly
| Genome size (bp) | 80,457,273 |
| GC content | 51.16% |
| Chromosomes sequence No. | 18 |
| Genome sequence No. | 63 |
| Maximum genome sequence length (bp) | 8,587,003 |
| Minimum genome sequence length (bp) | 5,545 |
| Average genome sequence length (bp) | 1,277,100 |
| Genome sequence N50 (bp) | 3,879,088 |
| Genome sequence N90 (bp) | 2,735,685 |