- Scientific Name
- Sus scrofa
- Common Names
- pigs, swine, wild boar; pig;
- Bioproject
- PRJCA037722
- Biosample
- SAMC4888961
- Accession No.
- GWHGAMV00000000.1
- GWH reannotation accession
- -
- GSA raw reads
- CRR1702916
- GVM variations of the species
- 90,901,492 (SNP), 12,087,428 (Indel)
- Submitter Organization
- Institute of Animal Husbandry and Veterinary Medicine, Anhui Academy of Agricultural Sciences
- Contact
- wei zhang, wzhang1991@126.com
- Sequence author(s)
- wei zhang
- Released Date
- 2025-05-08
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Assembly method
- HiFiasm v0.19.6
- Sequencing & coverage
- Pacbio_Revio 94.89
- Download
- DNA
- Publication(s)
- Wei Zhang, et al. A high-quality chromosome-level genome assembly and annotation of Anqing Six-end-white pig (Sus scrofa). Scientific Data. 2025, 12(1): 1656.
| Assembly Accession | GWH Reannotation Accession | Assembly Name | Assembly Level | Released Date | Download Files |
|---|---|---|---|---|---|
| GWHGAMV00000000.1 | - | AAAS_Anqing | Draft genome in chromosome level | 2025-05-08 |
DNA
|
Statistics of Genome Assembly
| Genome size (bp) | 2,660,441,857 |
| GC content | 42.57% |
| Chromosomes sequence No. | 20 |
| Genome sequence No. | 30 |
| Maximum genome sequence length (bp) | 291,651,123 |
| Minimum genome sequence length (bp) | 32,261 |
| Average genome sequence length (bp) | 88,681,395 |
| Genome sequence N50 (bp) | 143,096,131 |
| Genome sequence N90 (bp) | 69,194,913 |