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  • Eospalax fontanierii baileyi
  • plateau_zokor_v2.1
    • Scientific Name
    Eospalax fontanierii baileyi
    Common Names
    plateau zokor; Eospalax baileyi, Myospalax baileyi
    Bioproject
    PRJCA002092
    Biosample
    SAMC126955
    Accession No.
    GWHABJZ00000000
    GWH reannotation accession
    -
    GSA raw reads
    CRR106049, CRR106048, CRR106050, CRR106054, CRR106053,
    GVM variations of the species
    -
    Submitter Organization
    State Key Laboratory of Genetic Resources and Evolution, Kunming Institute of Zoology, Chinese Academy of Sciences
    Contact
    Tao Zhang, zhangtao@mail.kiz.ac.cn
    Sequence author(s)
    Tao Zhang
    Released Date
    2020-06-02
    Assembly Level
    Draft genome in scaffold level
    Genome Representation
    Full Genome
    Assembly method
    PBJelly v15.8.24
    Sequencing & coverage
    PacBio 10.0
    Download
    DNA GFF RNA Protein
    Publication(s)
    Tao Zhang, et al. Phenotypic and genomic adaptations to the extremely high elevation in plateau zokor (Myospalax baileyi). Molecular Ecology. 2021.
    Assembly Accession GWH Reannotation Accession Assembly Name Assembly Level Released Date Download Files
    GWHABJZ00000000 - plateau_zokor_v2.1 Draft genome in chromosome level 2020-06-02 DNA GFF RNA Protein

    Statistics of Genome Assembly

    Genome size (bp) 2,569,336,452
    GC content 41.22%
    Scaffold sequence No. 14,401
    Maximum scaffold sequence length (bp) 33,028,688
    Minimum scaffold sequence length (bp) 2,000
    Average scaffold sequence length (bp) 178,414
    Scaffold N50 (bp) 6,701,949
    Scaffold N90 (bp) 720,808
    Annotation of Whole Genome Assembly
    Protein Total
    Total 48,833 48,833