- Scientific Name
- Severe acute respiratory syndrome coronavirus 2
- Common Names
- -
- Bioproject
- PRJCA002165
- Biosample
- SAMC133244
- Accession No.
- GWHABKI00000000
- GWH reannotation accession
- -
- GSA raw reads
- -
- GVM variations of the species
- 16,114 (SNP), 820 (Indel)
- Submitter Organization
- NHC Key Laboratory of Systems Biology of Pathogens and Christophe Mérieux Laboratory, Institute of Pathogen Biology, Chinese Academy of Medical Sciences & Peking Union Medical College
- Contact
- Lili Ren(renliliipb@163.com), Jianwei Wang(wangjw28@163.com), Qi Jin(jinqi@ipbcams.ac.cn), Zichun Xiang(xiangzch@163.com), Zhiqiang Wu(wuzq2009@ipbcams.ac.cn), Chao Wu(feifeifly214@sina.com), Yiwei Liu(liuyiwei_1314@163.com), Jian Yang(yangj@ipbcams.ac.cn), Bo Liu(13810126161@163.com)
- Sequence author(s)
- Lili Ren, Jianwei Wang, Qi Jin, Zichun Xiang, Zhiqiang Wu, Chao Wu, Yiwei Liu, Jian Yang, Bo Liu
- Released Date
- 2020-01-26
- Assembly Level
- Complete genome
- Genome Representation
- Full Genome
- Assembly method
- Megahit v.1.2.8
- Sequencing & coverage
- Illumina NextSeq 500 3498.0
- Download
- DNA GFF RNA CDS Protein
- Reannotation Download
- -
- Publication(s)
- Li-Li Ren, et al. Identification of a novel coronavirus causing severe pneumonia in human. Chinese Medical Journal. 2020.
Statistics of Genome Assembly
| Genome size (bp) | 29,890 |
| GC content | 37.99% |
Annotation of Whole Genome Assembly
| Protein | Total | |
|---|---|---|
| Total | 12 | 12 |