- Scientific Name
- Severe acute respiratory syndrome coronavirus 2
- Common Names
- -
- Bioproject
- PRJCA002163
- Biosample
- SAMC133239
- Accession No.
- GWHABKN00000000
- GWH reannotation accession
- -
- GSA raw reads
- CRR122285
- GVM variations of the species
- 16,114 (SNP), 820 (Indel)
- Submitter Organization
- CAS Key Laboratory of Special Pathogens and Biosafety and Center for Emerging Infectious Diseases, Wuhan Institute of Virology, Chinese Academy of Sciences
- Contact
- Peng Zhou(peng.zhou@wh.iov.cn), Xinglou Yang(yangxl@wh.iov.cn), Xianguang Wang(907395635@qq.com), Lei Zhang(zhanglei@wh.iov.cn), Yan Zhu(zhuyan@wh.iov.cn), Haorui Si(544728460@qq.com), Zhengli Shi(zlshi@wh.iov.cn)
- Sequence author(s)
- Peng Zhou, Xinglou Yang, Xianguang Wang, Lei Zhang, Yan Zhu, Haorui Si, Zhengli Shi
- Released Date
- 2020-01-30
- Assembly Level
- Complete genome
- Genome Representation
- Full Genome
- Assembly method
- Geneious v11.0.3
Megahit v1.2.9 - Sequencing & coverage
- Illumina MiSeq 49714.60029
MGISEQ 2000 298209.6269 - Download
- DNA GFF RNA CDS Protein
- Reannotation Download
- -
- Publication(s)
- Peng Zhou, et al. A pneumonia outbreak associated with a new coronavirus of probable bat origin. Nature. 2020, 579(7798):270-273.
Statistics of Genome Assembly
| Genome size (bp) | 29,854 |
| GC content | 38.03% |
Annotation of Whole Genome Assembly
| Protein | Total | |
|---|---|---|
| Total | 12 | 12 |