Scientific Name
Protopterus annectens
Common Names
West African lungfish; Lepidosiren annectens, Rhinocryptis annectens
Bioproject
PRJCA002950
Biosample
SAMC199798
Accession No.
GWHANVS00000000
GWH reannotation accession
-
GSA raw reads
CRR259455
GVM variations of the species
-
Submitter Organization
School of Ecology and Environment, Northwestern Polytechnical University
Contact
Yuan Yuan Kun Wang, wangkun@nwpu.edu.cn
Sequence author(s)
Kun Wang
Released Date
2021-01-28
Assembly Level
Draft genome in chromosome level
Genome Representation
Full Genome
Assembly method
Wtdbg2.huge 2020
NextDenovo v1.0
NextPolish v1.01
Bionano Solve hybrid scaffold pipeline 2018
3D-DNA v180419
Juicebox Assembly Tools v1.9.9
Sequencing & coverage
MGISEQ 2000 platform 50.0
GridION and PromethION 50.0
Download
DNA
Publication(s)
-
Assembly Accession GWH Reannotation Accession Assembly Name Assembly Level Released Date Download Files
GWHANVS00000000 - lungfish Draft genome in scaffold level 2021-01-28 DNA

Statistics of Genome Assembly

Genome size (bp) 40,054,324,735
GC content 40.21%
Chromosomes sequence No. 17
Genome sequence No. 12,657
Maximum genome sequence length (bp) 5,260,428,656
Minimum genome sequence length (bp) 1,528
Average genome sequence length (bp) 3,164,599
Genome sequence N50 (bp) 2,813,524,174
Genome sequence N90 (bp) 1,371,727,335