- Scientific Name
- Escherichia ruysiae
- Common Names
- -
- Bioproject
- PRJCA035240
- Biosample
- SAMC5010266
- Accession No.
- GWHGDSV00000000.1
- GWH reannotation accession
- GWHRA_GDSV00000000.1
- GSA raw reads
- -
- GVM variations of the species
- -
- Submitter Organization
- State Key Laboratory of Microbial Resource, Institute of Microbiology, Chinese Academy of Sciences
- Contact
- zerui Wang, 672441216@qq.con
- Sequence author(s)
- zerui Wang
- Released Date
- 2025-06-01
- Assembly Level
- Draft genome in contig level
- Genome Representation
- Full Genome
- Assembly method
- SPAdes v3.13.0
- Sequencing & coverage
- illum novaseq 6000 100
- Download
- DNA Reannotation DNA Reannotation GFF Reannotation RNA Reannotation CDS Reannotation Protein
- Publication(s)
- -
| Assembly Accession | GWH Reannotation Accession | Assembly Name | Assembly Level | Released Date | Download Files |
|---|---|---|---|---|---|
| GWHGDSV00000000.1 | GWHRA_GDSV00000000.1 | Genome_result_A26 | Draft genome in contig level | 2025-06-01 |
DNA
Reannotation DNA Reannotation GFF Reannotation RNA Reannotation CDS Reannotation Protein |
Statistics of Genome Assembly
| Genome size (bp) | 5,267,941 |
| GC content | 50.37% |
| Contig sequence No. | 128 |
| Maximum contig sequence length (bp) | 456,237 |
| Minimum contig sequence length (bp) | 508 |
| Average contig sequence length (bp) | 41,156 |
| Contig N50 (bp) | 147,118 |
| Contig N90 (bp) | 37,088 |
Statistics of Genome Assembly
| Genome size (bp) | 5,267,941 |
| GC content | 50.37% |
| Contig sequence No. | 128 |
| Maximum contig sequence length (bp) | 456,237 |
| Minimum contig sequence length (bp) | 508 |
| Average contig sequence length (bp) | 41,156 |
| Contig N50 (bp) | 147,118 |
| Contig N90 (bp) | 37,088 |
Annotation of Whole Genome Assembly
| Protein | tRNA | rRNA | ncRNA | Pseudogene | Others | Total | |
|---|---|---|---|---|---|---|---|
| Total | 4,961 | 80 | 17 | 3 | 169 | 150 | 5,380 |