- Scientific Name
- Magnolia zenii
- Common Names
- -
- Bioproject
- PRJCA037928
- Biosample
- SAMC5173072
- Accession No.
- GWHGEBD00000000.1
- GWH reannotation accession
- -
- GSA raw reads
- CRR1877521
- GVM variations of the species
- -
- Submitter Organization
- Institute of Botany, Jiangsu Province and Chinese Academy of Sciences (Nanjing Botanical Garden Mem. Sun Yat-Sen)
- Contact
- Baocheng Wu, wubaocheng2015@163.com
- Sequence author(s)
- Naiwei Li
- Released Date
- 2025-08-13
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Assembly method
- hifiasm 0.19.8
- Sequencing & coverage
- PacBio 50
- Download
- DNA GFF RNA CDS Protein
- Publication(s)
- Naiwei Li, et al. Near telomere-to-telomere (T2T) level genome assembly of the critically endangered plant Magnolia zenii (Magnoliaceae). Science Data. 2025-12: 1928.
Statistics of Genome Assembly
| Genome size (bp) | 3,599,591,302 |
| GC content | 40.43% |
| Organellas sequence No. | 2 |
| Genome sequence No. | 40 |
| Maximum genome sequence length (bp) | 151,657,134 |
| Minimum genome sequence length (bp) | 160,079 |
| Average genome sequence length (bp) | 89,989,783 |
| Genome sequence N50 (bp) | 86,565,855 |
| Genome sequence N90 (bp) | 71,954,542 |
Annotation of Whole Genome Assembly
| Protein | tRNA | rRNA | ncRNA | Total | |
|---|---|---|---|---|---|
| Chloroplast | 30 | 22 | 0 | 16 | 68 |
| Mitochondrion | 34 | 25 | 0 | 23 | 82 |
| Others | 87,160 | 1,120 | 718 | 3,356 | 92,354 |
| Total | 87,224 | 1,167 | 718 | 3,395 | 92,504 |
Annotation Details
| ChrID | Protein | tRNA | rRNA | ncRNA | Total |
|---|---|---|---|---|---|
| Chloroplast | 30 | 22 | 0 | 16 | 68 |
| Mitochondrion | 34 | 25 | 0 | 23 | 82 |
| Others | 87,160 | 1,120 | 718 | 3,356 | 92,354 |
| Total | 87,224 | 1,167 | 718 | 3,395 | 92,504 |