- Scientific Name
- Haemaphysalis longicornis
- Common Names
- longhorned tick;
- Bioproject
- PRJCA040748
- Biosample
- SAMC5162365
- Accession No.
- GWHGEDP00000000.1
- GWH reannotation accession
- -
- GSA raw reads
- -
- GVM variations of the species
- -
- Submitter Organization
- State Key Laboratory of Pathogen and Biosecurity, Academy of Military Medical Sciences
- Contact
- WuChun Cao, caowuchun@126.com
- Sequence author(s)
- Tianhong Wang, Wenqiang Shi, YiFei Wang, LianFeng Li, XiaoMing Cui, Di Zhao, ShiJing Shen, WenJie Zhu, WanYing Gao, Hua Wei, JiaJing Zheng, Zhijun Yu, XiaoYu Shi, DaiYun Zhu, Lin Zhao, Na Jia, JiaFu Jiang, Jingze Liu, WuChun Cao
- Released Date
- 2025-08-01
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Assembly method
- Canu v. 1.7
FALCON v. 1.0
WTDBG v. 1.1.006
SOAPdenovo v. 1.0
Quickmerge v. unknown - Sequencing & coverage
- PacBio Sequel 95
- Download
- DNA GFF RNA CDS Protein
- Publication(s)
- -
Statistics of Genome Assembly
| Genome size (bp) | 2,554,970,390 |
| GC content | 47.39% |
| Chromosomes sequence No. | 1 |
| Genome sequence No. | 3,890 |
| Maximum genome sequence length (bp) | 348,261,740 |
| Minimum genome sequence length (bp) | 3,404 |
| Average genome sequence length (bp) | 656,805 |
| Genome sequence N50 (bp) | 204,922,340 |
| Genome sequence N90 (bp) | 1,238,896 |
Annotation of Whole Genome Assembly
| Protein | Pseudogene | Total | |
|---|---|---|---|
| Total | 23,542 | 510 | 24,052 |