- Scientific Name
- Eisenia andrei
- Common Names
- Eisenia fetida andrei, Eiseniella andrei
- Bioproject
- PRJCA002327
- Biosample
- SAMC141098
- Accession No.
- GWHACBE00000000
- GWH reannotation accession
- -
- GSA raw reads
- -
- GVM variations of the species
- -
- Submitter Organization
- The Omics Technology Research Center, Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences
- Contact
- xiaobo wang(wangxiaobo@caas.cn)
- Sequence author(s)
- xiaobo wang
- Released Date
- 2020-04-10
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Assembly method
- wtdbg 1.2.7
- Sequencing & coverage
- PacBio 80.0
- Download
- DNA GFF RNA CDS Protein
- Reannotation Download
- -
- Publication(s)
- xiaobo wang. The Earthworm Genome Reveals Molecular and Cellular Mechanisms underlying Regeneration. Nature communications. 2020.
Statistics of Genome Assembly
| Genome size (bp) | 1,315,326,768 |
| GC content | 41.12% |
| Chromosomes sequence No. | 11 |
| Genome sequence No. | 3,633 |
| Maximum genome sequence length (bp) | 159,027,471 |
| Minimum genome sequence length (bp) | 2,686 |
| Average genome sequence length (bp) | 362,050 |
| Genome sequence N50 (bp) | 111,976,267 |
| Genome sequence N90 (bp) | 106,041 |
Annotation of Whole Genome Assembly
| Protein | Total | |
|---|---|---|
| Chromosome | 28,362 | 28,362 |
| Others | 3,455 | 3,455 |
| Total | 31,817 | 31,817 |
Annotation Details
| ChrID | Protein | Total |
|---|---|---|
| chr1 | 3,850 | 3,850 |
| chr10 | 1,992 | 1,992 |
| chr11 | 1,594 | 1,594 |
| chr2 | 3,607 | 3,607 |
| chr3 | 3,158 | 3,158 |
| chr4 | 3,091 | 3,091 |
| chr5 | 2,336 | 2,336 |
| chr6 | 2,314 | 2,314 |
| chr7 | 2,320 | 2,320 |
| chr8 | 2,197 | 2,197 |
| chr9 | 1,903 | 1,903 |
| Others | 3,455 | 3,455 |
| Total | 31,817 | 31,817 |