- Scientific Name
- Digitaria sanguinalis
- Common Names
- -
- Bioproject
- PRJCA044252
- Biosample
- SAMC5750825
- Accession No.
- GWHGGEX00000000.1
- GWH reannotation accession
- -
- GSA raw reads
- -
- GVM variations of the species
- -
- Submitter Organization
- Zhejiang Universirty, Institute of Crop Sciences
- Contact
- Yujie Huang, 12116008@zju.edu.cn
- Sequence author(s)
- Yujie Huang
- Released Date
- 2025-09-12
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Assembly method
- Hifiasm v0.19.8-r603
- Sequencing & coverage
- Pacbi 81
ONT 88
Illumin 42
HiC 79 - Download
- DNA GFF RNA CDS Protein
- Publication(s)
- -
Statistics of Genome Assembly
| Genome size (bp) | 1,369,144,665 |
| GC content | 45.62% |
| Chromosomes sequence No. | 23 |
| Genome sequence No. | 420 |
| Maximum genome sequence length (bp) | 69,850,184 |
| Minimum genome sequence length (bp) | 71 |
| Average genome sequence length (bp) | 3,259,868 |
| Genome sequence N50 (bp) | 51,619,479 |
| Genome sequence N90 (bp) | 38,605,977 |
Annotation of Whole Genome Assembly
| Protein | Total | |
|---|---|---|
| Chromosome | 99,347 | 99,347 |
| Others | 15,647 | 15,647 |
| Total | 114,994 | 114,994 |
Annotation Details
| ChrID | Protein | Total |
|---|---|---|
| chr10 | 5,107 | 5,107 |
| chr11 | 5,346 | 5,346 |
| chr12 | 4,163 | 4,163 |
| chr13 | 4,502 | 4,502 |
| chr15 | 5,329 | 5,329 |
| chr16 | 4,417 | 4,417 |
| chr17 | 4,522 | 4,522 |
| chr18 | 4,254 | 4,254 |
| chr19 | 2,784 | 2,784 |
| chr2 | 3,695 | 3,695 |
| chr21 | 2,233 | 2,233 |
| chr22 | 2,963 | 2,963 |
| chr23 | 2,745 | 2,745 |
| chr24 | 3,197 | 3,197 |
| chr25 | 3,434 | 3,434 |
| chr26 | 3,236 | 3,236 |
| chr27 | 2,965 | 2,965 |
| chr4 | 6,017 | 6,017 |
| chr5 | 6,815 | 6,815 |
| chr6 | 6,548 | 6,548 |
| chr7 | 5,351 | 5,351 |
| chr8 | 5,065 | 5,065 |
| chr9 | 4,659 | 4,659 |
| Others | 15,647 | 15,647 |
| Total | 114,994 | 114,994 |