- Scientific Name
- Digitaria milanjiana
- Common Names
- -
- Bioproject
- PRJCA044252
- Biosample
- SAMC5750827
- Accession No.
- GWHGGEZ00000000.1
- GWH reannotation accession
- -
- GSA raw reads
- -
- GVM variations of the species
- -
- Submitter Organization
- Zhejiang Universirty, Institute of Crop Sciences
- Contact
- Yujie Huang, 12116008@zju.edu.cn
- Sequence author(s)
- Yujie Huang
- Released Date
- 2025-09-12
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Assembly method
- Hifiasm v0.19.8-r603
- Sequencing & coverage
- Pacbio 56
Illumina 50 - Download
- DNA GFF RNA CDS Protein
- Publication(s)
- -
Statistics of Genome Assembly
| Genome size (bp) | 890,946,189 |
| GC content | 45.76% |
| Chromosomes sequence No. | 12 |
| Genome sequence No. | 18 |
| Maximum genome sequence length (bp) | 64,927,020 |
| Minimum genome sequence length (bp) | 33,548,115 |
| Average genome sequence length (bp) | 49,497,011 |
| Genome sequence N50 (bp) | 52,225,969 |
| Genome sequence N90 (bp) | 41,366,871 |
Annotation of Whole Genome Assembly
| Protein | Total | |
|---|---|---|
| Chromosome | 45,645 | 45,645 |
| Others | 28,703 | 28,703 |
| Total | 74,348 | 74,348 |
Annotation Details
| ChrID | Protein | Total |
|---|---|---|
| chr1 | 3,203 | 3,203 |
| chr13 | 2,178 | 2,178 |
| chr14 | 2,624 | 2,624 |
| chr15 | 2,612 | 2,612 |
| chr16 | 3,203 | 3,203 |
| chr17 | 2,924 | 2,924 |
| chr18 | 3,392 | 3,392 |
| chr3 | 5,957 | 5,957 |
| chr4 | 4,590 | 4,590 |
| chr5 | 4,603 | 4,603 |
| chr6 | 5,204 | 5,204 |
| chr8 | 5,155 | 5,155 |
| Others | 28,703 | 28,703 |
| Total | 74,348 | 74,348 |