- Scientific Name
- Anisodus tanguticus
- Common Names
- -
- Bioproject
- PRJCA041626
- Biosample
- SAMC5318660
- Accession No.
- GWHGGGA00000000.1
- GWH reannotation accession
- -
- GSA raw reads
- CRR1917053
- GVM variations of the species
- -
- Submitter Organization
- The Second Affiliated Hospital, Army Medical University
- Contact
- peng shu(sp1373751728@163.com)
- Sequence author(s)
- peng shu
- Released Date
- 2025-09-22
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Assembly method
- Hifiasm 0.19.6-r595
HiCup v0.8.3 - Sequencing & coverage
- PacBio 57.36
- Download
- DNA GFF RNA CDS Protein
- Reannotation Download
- -
- Publication(s)
- -
Statistics of Genome Assembly
| Genome size (bp) | 1,599,644,269 |
| GC content | 37.66% |
| Chromosomes sequence No. | 10 |
| Genome sequence No. | 1,859 |
| Maximum genome sequence length (bp) | 90,893,974 |
| Minimum genome sequence length (bp) | 6,945 |
| Average genome sequence length (bp) | 860,486 |
| Genome sequence N50 (bp) | 62,011,027 |
| Genome sequence N90 (bp) | 47,817,825 |
Annotation of Whole Genome Assembly
| Protein | Others | Total | |
|---|---|---|---|
| Chromosome | 16,882 | 12 | 16,894 |
| Others | 24,102 | 37 | 24,139 |
| Total | 40,984 | 49 | 41,033 |
Annotation Details
| ChrID | Protein | Others | Total |
|---|---|---|---|
| chr10 | 1,469 | 4 | 1,473 |
| chr15 | 1,768 | 1 | 1,769 |
| chr16 | 1,962 | 3 | 1,965 |
| chr17 | 1,334 | 1 | 1,335 |
| chr19 | 1,604 | 1 | 1,605 |
| chr2 | 1,692 | 1 | 1,693 |
| chr22 | 1,143 | 1 | 1,144 |
| chr6 | 2,245 | 0 | 2,245 |
| chr8 | 1,576 | 0 | 1,576 |
| chr9 | 2,089 | 0 | 2,089 |
| Others | 24,102 | 37 | 24,139 |
| Total | 40,984 | 49 | 41,033 |