- Scientific Name
- Enterococcus raffinosus
- Common Names
- -
- Bioproject
- PRJNA612981
- Biosample
- SAMN14389560
- Accession No.
- GCA_019731795.1
- RefSeq Accession No.
- GCF_019731795.1
- RefSeq vs GenBank similarity
- identical
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- Heilongjiang bayi agricultural university
- Released Date
- 2023-12-12
- NCBI Released Date
- 2021-08-23
- Assembly Level
- Draft genome in scaffold level
- Genome Representation
- Full Genome
- Download
- DNA GFF RNA CDS Protein
- RefSeq Download
- RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein
- Publication(s) -
| Assembly Accession | RefSeq Accession | RefSeq vs GenBank similarity | Assembly Name | Assembly Level | NCBI Released Date | Download Files |
|---|---|---|---|---|---|---|
| GCA_019731795.1 | GCF_019731795.1 | identical | ASM1973179v1 | Draft genome in chromosome level | 2021-08-23 | DNA GFF RNA CDS Protein RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein |
Statistics of Genome Assembly
| Genome size (bp) | 4,325,715 |
| Chromosomes, organellas and plasmids sequnece No. | 0 |
| Genome sequence No. | 91 |
| GC content | 39 |
| Scaffold sequence No. | 91 |
| Scaffold L50 | 13 |
| Scaffold N50 (bp) | 119,791 |
| Scaffold N75 (bp) | 70,776 |
| Scaffold N90 (bp) | 26,638 |
| Contig sequence No. | 98 |
| Contig L50 | 14 |
| Contig N50 (bp) | 119,791 |
| Unique components No. | 91 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 7 |
| Ns gap sequence region length (bp) | 669 |
| Gaps No. between scaffolds | 0 |
Annotation of Whole Genome Assembly
| Protein | trna | rrna | ncrna | Pseudogene | Others | Total | |
|---|---|---|---|---|---|---|---|
| Total | 4142 | 62 | 3 | 1 | 120 | 3 | 4331 |
Statistics of Genome Assembly
| Genome size (bp) | 4,325,715 |
| Chromosomes, organellas and plasmids sequnece No. | 0 |
| Genome sequence No. | 91 |
| GC content | 39 |
| Scaffold sequence No. | 91 |
| Scaffold L50 | 13 |
| Scaffold N50 (bp) | 119,791 |
| Scaffold N75 (bp) | 70,776 |
| Scaffold N90 (bp) | 26,638 |
| Contig sequence No. | 98 |
| Contig L50 | 14 |
| Contig N50 (bp) | 119,791 |
| Unique components No. | 91 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 7 |
| Ns gap sequence region length (bp) | 669 |
| Gaps No. between scaffolds | 0 |
Annotation of Whole Genome Assembly
| Protein | trna | rrna | ncrna | Pseudogene | Others | Total | |
|---|---|---|---|---|---|---|---|
| Total | 4214 | 62 | 2 | asse1 | 74 | 3 | 4356 |