- Scientific Name
- Escherichia ruysiae
- Common Names
- -
- Bioproject
- PRJNA757375
- Biosample
- SAMN20959669
- Accession No.
- GCA_019839465.1
- RefSeq Accession No.
- GCF_019839465.1
- RefSeq vs GenBank similarity
- identical
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- Quadram Institute Bioscience
- Released Date
- 2023-10-18
- NCBI Released Date
- 2021-08-31
- Assembly Level
- Draft genome in scaffold level
- Genome Representation
- Full Genome
- Download
- DNA GFF RNA CDS Protein
- RefSeq Download
- RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein
- Publication(s) -
| Assembly Accession | RefSeq Accession | RefSeq vs GenBank similarity | Assembly Name | Assembly Level | NCBI Released Date | Download Files |
|---|---|---|---|---|---|---|
| GCA_019839465.1 | GCF_019839465.1 | identical | ASM1983946v1 | Draft genome in chromosome level | 2021-08-31 | DNA GFF RNA CDS Protein RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein |
Statistics of Genome Assembly
| Genome size (bp) | 4,422,434 |
| Chromosomes, organellas and plasmids sequnece No. | 0 |
| Genome sequence No. | 78 |
| GC content | 50.5 |
| Scaffold sequence No. | 78 |
| Scaffold L50 | 9 |
| Scaffold N50 (bp) | 153,030 |
| Scaffold N75 (bp) | 86,029 |
| Scaffold N90 (bp) | 43,430 |
| Contig sequence No. | 80 |
| Contig L50 | 9 |
| Contig N50 (bp) | 150,155 |
| Unique components No. | 78 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 2 |
| Ns gap sequence region length (bp) | 110 |
| Gaps No. between scaffolds | 0 |
Annotation of Whole Genome Assembly
| Protein | trna | rrna | ncrna | Pseudogene | Others | Total | |
|---|---|---|---|---|---|---|---|
| Total | 4103 | 78 | 9 | 6 | 137 | 3 | 4336 |