- Scientific Name
- Sphingomonadales bacterium
- Common Names
- -
- Bioproject
- PRJNA291433
- Biosample
- SAMN18623612
- Accession No.
- GCA_020200315.1
- RefSeq Accession No.
- -
- RefSeq vs GenBank similarity
- -
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- Instituto de Nutricion y Tecnologia de los Alimentos - Universidad de Chile
- Released Date
- 2023-12-23
- NCBI Released Date
- 2021-09-30
- Assembly Level
- Draft genome in scaffold level
- Genome Representation
- Full Genome
- Download
- DNA GFF RNA CDS Protein
- RefSeq Download
- -
- Publication(s) -
Statistics of Genome Assembly
| Genome size (bp) | 2,177,324 |
| Chromosomes, organellas and plasmids sequnece No. | 0 |
| Genome sequence No. | 202 |
| GC content | 65.5 |
| Scaffold sequence No. | 202 |
| Scaffold L50 | 40 |
| Scaffold N50 (bp) | 17,075 |
| Scaffold N75 (bp) | 10,499 |
| Scaffold N90 (bp) | 5,981 |
| Contig sequence No. | 216 |
| Contig L50 | 46 |
| Contig N50 (bp) | 15,926 |
| Unique components No. | 202 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 14 |
| Ns gap sequence region length (bp) | 1,098 |
| Gaps No. between scaffolds | 0 |
Annotation of Whole Genome Assembly
| Protein | trna | rrna | ncrna | Pseudogene | Others | Total | |
|---|---|---|---|---|---|---|---|
| Total | 2266 | 35 | 0 | 0 | 111 | 3 | 2415 |