- Scientific Name
- Roseibium aggregatum
- Common Names
- Stappia aggregata, Agrobacterium aggregatum, Labrenzia aggregata
- Bioproject
- PRJNA579581
- Biosample
- SAMN13117267
- Accession No.
- GCA_020882625.1
- RefSeq Accession No.
- GCF_020882625.1
- RefSeq vs GenBank similarity
- identical
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- Ocean University of China
- Released Date
- 2023-10-23
- NCBI Released Date
- 2021-11-16
- Assembly Level
- Complete genome
- Genome Representation
- Full Genome
- Download
- DNA GFF RNA CDS Protein
- RefSeq Download
- RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein
- Publication(s) -
| Assembly Accession | RefSeq Accession | RefSeq vs GenBank similarity | Assembly Name | Assembly Level | NCBI Released Date | Download Files |
|---|---|---|---|---|---|---|
| GCA_020882625.1 | GCF_020882625.1 | identical | ASM2088262v1 | Draft genome in contig level | 2021-11-16 | DNA GFF RNA CDS Protein RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein |
Statistics of Genome Assembly
| Genome size (bp) | 6,696,551 |
| Chromosomes, organellas and plasmids sequnece No. | 4 |
| Genome sequence No. | 4 |
| GC content | 59 |
| Scaffold sequence No. | 4 |
| Scaffold L50 | 1 |
| Scaffold N50 (bp) | 5,884,100 |
| Scaffold N75 (bp) | 5,884,100 |
| Scaffold N90 (bp) | 453,777 |
| Unique components No. | 4 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 0 |
| Ns gap sequence region length (bp) | 0 |
| Gaps No. between scaffolds | 0 |
Annotation of Whole Genome Assembly
| Protein | trna | rrna | ncrna | Pseudogene | Others | Total | |
|---|---|---|---|---|---|---|---|
| Total | 5967 | 52 | 9 | 1 | 66 | 3 | 6098 |
Statistics of Genome Assembly
| Genome size (bp) | 6,696,551 |
| Chromosomes, organellas and plasmids sequnece No. | 4 |
| Genome sequence No. | 4 |
| GC content | 59 |
| Scaffold sequence No. | 4 |
| Scaffold L50 | 1 |
| Scaffold N50 (bp) | 5,884,100 |
| Scaffold N75 (bp) | 5,884,100 |
| Scaffold N90 (bp) | 453,777 |
| Unique components No. | 4 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 0 |
| Ns gap sequence region length (bp) | 0 |
| Gaps No. between scaffolds | 0 |
Annotation of Whole Genome Assembly
| Protein | trna | rrna | ncrna | Pseudogene | Others | Total | |
|---|---|---|---|---|---|---|---|
| Total | 6027 | 52 | 9 | asse1 | 41 | 3 | 6133 |