Genome Warehouse

Scientific Name: Roseibium aggregatum
Common Names: Stappia aggregata, Agrobacterium aggregatum, Labrenzia aggregata
Bioproject: PRJNA579581
Biosample: SAMN13117271
Accession No.: GCA_020882645.1
RefSeq Accession No.: GCF_020882645.1
RefSeq vs GenBank similarity: identical
Source: NCBI
External Links: NCBI
Submitter Organization: Ocean University of China
Released Date: 2023-12-01
NCBI Released Date: 2021-11-16
Assembly Level: Complete genome
Genome Representation: Full Genome
Download: DNA GFF RNA CDS Protein
RefSeq Download: RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein
Publication(s)

Assembly Accession	RefSeq Accession	RefSeq vs GenBank similarity	Assembly Name	Assembly Level	NCBI Released Date	Download Files
GCA_020882645.1	GCF_020882645.1	identical	ASM2088264v1	Draft genome in contig level	2021-11-16	DNA GFF RNA CDS Protein RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein

Genome size (bp)	6,959,492
Chromosomes, organellas and plasmids sequnece No.	5
Genome sequence No.	5
Scaffold sequence No.	5
Scaffold L50	1
Scaffold N50 (bp)	5,831,420
Scaffold N75 (bp)	5,831,420
Scaffold N90 (bp)	467,105
Unique components No.	5
No. of regions with alternate loci or patches	0
Ns gap sequence No. (bp)	0
Ns gap sequence region length (bp)	0
Gaps No. between scaffolds	0

Annotation of Whole Genome Assembly

	Protein	trna	rrna	ncrna	Pseudogene	Others	Total
Total	6182	54	9	1	116	3	6365

Genome size (bp)	6,959,492
Chromosomes, organellas and plasmids sequnece No.	5
Genome sequence No.	5
GC content	59
Scaffold sequence No.	5
Scaffold L50	1
Scaffold N50 (bp)	5,831,420
Scaffold N75 (bp)	5,831,420
Scaffold N90 (bp)	467,105
Unique components No.	5
No. of regions with alternate loci or patches	0
Ns gap sequence No. (bp)	0
Ns gap sequence region length (bp)	0
Gaps No. between scaffolds	0

Annotation of Whole Genome Assembly

asse

	Protein	trna	rrna	ncrna	Pseudogene	Others	Total
Total	6232	54	9	1	86	3	6385