- Scientific Name
- Sphingomonadales bacterium
- Common Names
- -
- Bioproject
- PRJNA464361
- Biosample
- SAMN23604948
- Accession No.
- GCA_021298455.1
- RefSeq Accession No.
- -
- RefSeq vs GenBank similarity
- -
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- University of Michigan
- Released Date
- 2023-11-11
- NCBI Released Date
- 2021-12-27
- Assembly Level
- Draft genome in scaffold level
- Genome Representation
- Full Genome
- Download
- DNA GFF RNA CDS Protein
- RefSeq Download
- -
- Publication(s) -
Statistics of Genome Assembly
| Genome size (bp) | 2,350,043 |
| Chromosomes, organellas and plasmids sequnece No. | 0 |
| Genome sequence No. | 193 |
| GC content | 58 |
| Scaffold sequence No. | 193 |
| Scaffold L50 | 49 |
| Scaffold N50 (bp) | 14,698 |
| Scaffold N75 (bp) | 8,613 |
| Scaffold N90 (bp) | 6,054 |
| Contig sequence No. | 216 |
| Contig L50 | 55 |
| Contig N50 (bp) | 13,994 |
| Unique components No. | 193 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 23 |
| Ns gap sequence region length (bp) | 953 |
| Gaps No. between scaffolds | 0 |
Annotation of Whole Genome Assembly
| Protein | trna | rrna | ncrna | Pseudogene | Others | Total | |
|---|---|---|---|---|---|---|---|
| Total | 2314 | 34 | 1 | 0 | 109 | 2 | 2460 |