- Scientific Name
- Streptococcus mutans
- Common Names
- -
- Bioproject
- PRJNA817585
- Biosample
- SAMN26876582
- Accession No.
- GCA_023109585.1
- RefSeq Accession No.
- GCF_023109585.1
- RefSeq vs GenBank similarity
- identical
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- The University of Texas at Dallas
- Released Date
- 2023-12-09
- NCBI Released Date
- 2022-04-25
- Assembly Level
- Draft genome in scaffold level
- Genome Representation
- Full Genome
- Download
- DNA
- RefSeq Download
- RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein
- Publication(s) -
| Assembly Accession | RefSeq Accession | RefSeq vs GenBank similarity | Assembly Name | Assembly Level | NCBI Released Date | Download Files |
|---|---|---|---|---|---|---|
| GCA_023109585.1 | GCF_023109585.1 | identical | ASM2310958v1 | Draft genome in chromosome level | 2022-04-25 | DNA RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein |
Statistics of Genome Assembly
| Genome size (bp) | 2,041,017 |
| Chromosomes, organellas and plasmids sequnece No. | 0 |
| Genome sequence No. | 17 |
| GC content | 36.5 |
| Scaffold sequence No. | 17 |
| Scaffold L50 | 3 |
| Scaffold N50 (bp) | 333,161 |
| Scaffold N75 (bp) | 176,580 |
| Scaffold N90 (bp) | 171,127 |
| Contig sequence No. | 20 |
| Contig L50 | 3 |
| Contig N50 (bp) | 240,827 |
| Unique components No. | 17 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 3 |
| Ns gap sequence region length (bp) | 300 |
| Gaps No. between scaffolds | 0 |
Statistics of Genome Assembly
| Genome size (bp) | 2,041,017 |
| Chromosomes, organellas and plasmids sequnece No. | 0 |
| Genome sequence No. | 17 |
| GC content | 36.5 |
| Scaffold sequence No. | 17 |
| Scaffold L50 | 3 |
| Scaffold N50 (bp) | 333,161 |
| Scaffold N75 (bp) | 176,580 |
| Scaffold N90 (bp) | 171,127 |
| Contig sequence No. | 20 |
| Contig L50 | 3 |
| Contig N50 (bp) | 240,827 |
| Unique components No. | 17 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 3 |
| Ns gap sequence region length (bp) | 300 |
| Gaps No. between scaffolds | 0 |
Annotation of Whole Genome Assembly
| Protein | trna | rrna | ncrna | Pseudogene | Others | Total | |
|---|---|---|---|---|---|---|---|
| Total | 1864 | 43 | 3 | asse1 | 104 | 3 | 2018 |