- Scientific Name
- Sphingomonadales bacterium
- Common Names
- -
- Bioproject
- PRJNA852163
- Biosample
- SAMN30026368
- Accession No.
- GCA_026400295.1
- RefSeq Accession No.
- -
- RefSeq vs GenBank similarity
- -
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- Jill Banfield's Lab at Berkeley
- Released Date
- 2023-12-17
- NCBI Released Date
- 2022-11-24
- Assembly Level
- Draft genome in scaffold level
- Genome Representation
- Full Genome
- Download
- DNA GFF RNA CDS Protein
- RefSeq Download
- -
- Publication(s) -
Statistics of Genome Assembly
| Genome size (bp) | 1,767,002 |
| Chromosomes, organellas and plasmids sequnece No. | 0 |
| Genome sequence No. | 468 |
| GC content | 55 |
| Scaffold sequence No. | 468 |
| Scaffold L50 | 135 |
| Scaffold N50 (bp) | 4,369 |
| Scaffold N75 (bp) | 2,884 |
| Scaffold N90 (bp) | 2,060 |
| Contig sequence No. | 471 |
| Contig L50 | 136 |
| Contig N50 (bp) | 4,316 |
| Unique components No. | 468 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 3 |
| Ns gap sequence region length (bp) | 83 |
| Gaps No. between scaffolds | 0 |
Annotation of Whole Genome Assembly
| Protein | trna | rrna | ncrna | Pseudogene | Others | Total | |
|---|---|---|---|---|---|---|---|
| Total | 1953 | 31 | 1 | 0 | 92 | 4 | 2081 |