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  • Streptococcus pseudopneumoniae
  • ASM107080v1
    • Scientific Name
    Streptococcus pseudopneumoniae
    Common Names
    -
    Bioproject
    PRJNA267549
    Biosample
    SAMN03197470
    Accession No.
    GCA_001070805.1
    RefSeq Accession No.
    GCF_001070805.1
    RefSeq vs GenBank similarity
    identical
    Source
    NCBI
    External Links
    NCBI
    Submitter Organization
    University of Washington
    Released Date
    2023-10-23
    NCBI Released Date
    2015-07-10
    Assembly Level
    Draft genome in scaffold level
    Genome Representation
    Full Genome
    Download
    DNA
    RefSeq Download
    RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein
    Publication(s)
    -
    Assembly Accession RefSeq Accession RefSeq vs GenBank similarity Assembly Name Assembly Level NCBI Released Date Download Files
    GCA_001070805.1 GCF_001070805.1 identical ASM107080v1 Draft genome in chromosome level 2015-07-10 DNA
    RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein

    Statistics of Genome Assembly

    Genome size (bp) 2,159,589
    Chromosomes, organellas and plasmids sequnece No. 0
    Genome sequence No. 66
    GC content 40
    Scaffold sequence No. 66
    Scaffold L50 7
    Scaffold N50 (bp) 106,171
    Scaffold N75 (bp) 46,095
    Scaffold N90 (bp) 33,017
    Contig sequence No. 67
    Contig L50 7
    Contig N50 (bp) 106,171
    Unique components No. 66
    No. of regions with alternate loci or patches 0
    Ns gap sequence No. (bp) 1
    Ns gap sequence region length (bp) 100
    Gaps No. between scaffolds 0

    Statistics of Genome Assembly

    Genome size (bp) 2,159,589
    Chromosomes, organellas and plasmids sequnece No. 0
    Genome sequence No. 66
    GC content 40
    Scaffold sequence No. 66
    Scaffold L50 7
    Scaffold N50 (bp) 106,171
    Scaffold N75 (bp) 46,095
    Scaffold N90 (bp) 33,017
    Contig sequence No. 67
    Contig L50 7
    Contig N50 (bp) 106,171
    Unique components No. 66
    No. of regions with alternate loci or patches 0
    Ns gap sequence No. (bp) 1
    Ns gap sequence region length (bp) 100
    Gaps No. between scaffolds 0
    Annotation of Whole Genome Assembly
    asse
    Protein trna rrna ncrna Pseudogene Others Total
    Total 2040 66 110 59 3 2179