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  • Streptococcus pseudopneumoniae
  • ASM107081v1
    • Scientific Name
    Streptococcus pseudopneumoniae
    Common Names
    -
    Bioproject
    PRJNA267549
    Biosample
    SAMN03197505
    Accession No.
    GCA_001070815.1
    RefSeq Accession No.
    GCF_001070815.1
    RefSeq vs GenBank similarity
    identical
    Source
    NCBI
    External Links
    NCBI
    Submitter Organization
    University of Washington
    Released Date
    2023-10-25
    NCBI Released Date
    2015-07-10
    Assembly Level
    Draft genome in scaffold level
    Genome Representation
    Full Genome
    Download
    DNA
    RefSeq Download
    RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein
    Publication(s)
    -
    Assembly Accession RefSeq Accession RefSeq vs GenBank similarity Assembly Name Assembly Level NCBI Released Date Download Files
    GCA_001070815.1 GCF_001070815.1 identical ASM107081v1 Draft genome in chromosome level 2015-07-10 DNA
    RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein

    Statistics of Genome Assembly

    Genome size (bp) 1,893,353
    Chromosomes, organellas and plasmids sequnece No. 0
    Genome sequence No. 72
    GC content 40.5
    Scaffold sequence No. 72
    Scaffold L50 14
    Scaffold N50 (bp) 45,622
    Scaffold N75 (bp) 29,410
    Scaffold N90 (bp) 15,116
    Contig sequence No. 74
    Contig L50 14
    Contig N50 (bp) 44,894
    Unique components No. 72
    No. of regions with alternate loci or patches 0
    Ns gap sequence No. (bp) 2
    Ns gap sequence region length (bp) 200
    Gaps No. between scaffolds 0

    Statistics of Genome Assembly

    Genome size (bp) 1,893,353
    Chromosomes, organellas and plasmids sequnece No. 0
    Genome sequence No. 72
    GC content 40.5
    Scaffold sequence No. 72
    Scaffold L50 14
    Scaffold N50 (bp) 45,622
    Scaffold N75 (bp) 29,410
    Scaffold N90 (bp) 15,116
    Contig sequence No. 74
    Contig L50 14
    Contig N50 (bp) 44,894
    Unique components No. 72
    No. of regions with alternate loci or patches 0
    Ns gap sequence No. (bp) 2
    Ns gap sequence region length (bp) 200
    Gaps No. between scaffolds 0
    Annotation of Whole Genome Assembly
    asse
    Protein trna rrna ncrna Pseudogene Others Total
    Total 1738 31 90 38 3 1819