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  • Streptococcus pseudopneumoniae
  • ASM107292v1
    • Scientific Name
    Streptococcus pseudopneumoniae
    Common Names
    -
    Bioproject
    PRJNA267549
    Biosample
    SAMN03197628
    Accession No.
    GCA_001072925.1
    RefSeq Accession No.
    GCF_001072925.1
    RefSeq vs GenBank similarity
    identical
    Source
    NCBI
    External Links
    NCBI
    Submitter Organization
    University of Washington
    Released Date
    2023-10-25
    NCBI Released Date
    2015-07-10
    Assembly Level
    Draft genome in scaffold level
    Genome Representation
    Full Genome
    Download
    DNA
    RefSeq Download
    RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein
    Publication(s)
    -
    Assembly Accession RefSeq Accession RefSeq vs GenBank similarity Assembly Name Assembly Level NCBI Released Date Download Files
    GCA_001072925.1 GCF_001072925.1 identical ASM107292v1 Draft genome in chromosome level 2015-07-10 DNA
    RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein

    Statistics of Genome Assembly

    Genome size (bp) 2,118,581
    Chromosomes, organellas and plasmids sequnece No. 0
    Genome sequence No. 132
    GC content 39.5
    Scaffold sequence No. 132
    Scaffold L50 14
    Scaffold N50 (bp) 53,773
    Scaffold N75 (bp) 37,013
    Scaffold N90 (bp) 15,840
    Contig sequence No. 133
    Contig L50 14
    Contig N50 (bp) 53,773
    Unique components No. 132
    No. of regions with alternate loci or patches 0
    Ns gap sequence No. (bp) 1
    Ns gap sequence region length (bp) 100
    Gaps No. between scaffolds 0

    Statistics of Genome Assembly

    Genome size (bp) 2,118,581
    Chromosomes, organellas and plasmids sequnece No. 0
    Genome sequence No. 132
    GC content 39.5
    Scaffold sequence No. 132
    Scaffold L50 14
    Scaffold N50 (bp) 53,773
    Scaffold N75 (bp) 37,013
    Scaffold N90 (bp) 15,840
    Contig sequence No. 133
    Contig L50 14
    Contig N50 (bp) 53,773
    Unique components No. 132
    No. of regions with alternate loci or patches 0
    Ns gap sequence No. (bp) 1
    Ns gap sequence region length (bp) 100
    Gaps No. between scaffolds 0
    Annotation of Whole Genome Assembly
    asse
    Protein trna rrna ncrna Pseudogene Others Total
    Total 1991 28 30 65 3 2090