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  • Streptococcus pseudopneumoniae
  • ASM107497v1
    • Scientific Name
    Streptococcus pseudopneumoniae
    Common Names
    -
    Bioproject
    PRJNA267549
    Biosample
    SAMN03197956
    Accession No.
    GCA_001074975.1
    RefSeq Accession No.
    GCF_001074975.1
    RefSeq vs GenBank similarity
    identical
    Source
    NCBI
    External Links
    NCBI
    Submitter Organization
    University of Washington
    Released Date
    2024-01-02
    NCBI Released Date
    2015-07-10
    Assembly Level
    Draft genome in scaffold level
    Genome Representation
    Full Genome
    Download
    DNA
    RefSeq Download
    RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein
    Publication(s)
    -
    Assembly Accession RefSeq Accession RefSeq vs GenBank similarity Assembly Name Assembly Level NCBI Released Date Download Files
    GCA_001074975.1 GCF_001074975.1 identical ASM107497v1 Draft genome in chromosome level 2015-07-10 DNA
    RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein

    Statistics of Genome Assembly

    Genome size (bp) 2,094,444
    Chromosomes, organellas and plasmids sequnece No. 0
    Genome sequence No. 142
    GC content 39.5
    Scaffold sequence No. 142
    Scaffold L50 20
    Scaffold N50 (bp) 33,725
    Scaffold N75 (bp) 21,589
    Scaffold N90 (bp) 9,200
    Contig sequence No. 146
    Contig L50 20
    Contig N50 (bp) 33,725
    Unique components No. 142
    No. of regions with alternate loci or patches 0
    Ns gap sequence No. (bp) 4
    Ns gap sequence region length (bp) 400
    Gaps No. between scaffolds 0

    Statistics of Genome Assembly

    Genome size (bp) 2,094,444
    Chromosomes, organellas and plasmids sequnece No. 0
    Genome sequence No. 142
    GC content 39.5
    Scaffold sequence No. 142
    Scaffold L50 20
    Scaffold N50 (bp) 33,725
    Scaffold N75 (bp) 21,589
    Scaffold N90 (bp) 9,200
    Contig sequence No. 146
    Contig L50 20
    Contig N50 (bp) 33,725
    Unique components No. 142
    No. of regions with alternate loci or patches 0
    Ns gap sequence No. (bp) 4
    Ns gap sequence region length (bp) 400
    Gaps No. between scaffolds 0
    Annotation of Whole Genome Assembly
    asse
    Protein trna rrna ncrna Pseudogene Others Total
    Total 1998 27 30 105 3 2136