Genome Warehouse

Scientific Name: Streptococcus pseudopneumoniae
Common Names: -
Bioproject: PRJNA267549
Biosample: SAMN03197638
Accession No.: GCA_001076775.1
RefSeq Accession No.: GCF_001076775.1
RefSeq vs GenBank similarity: identical
Source: NCBI
External Links: NCBI
Submitter Organization: University of Washington
Released Date: 2023-12-11
NCBI Released Date: 2015-07-10
Assembly Level: Draft genome in scaffold level
Genome Representation: Full Genome
Download: DNA
RefSeq Download: RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein
Publication(s)

History

Assembly Accession	RefSeq Accession	RefSeq vs GenBank similarity	Assembly Name	Assembly Level	NCBI Released Date	Download Files
GCA_001076775.1	GCF_001076775.1	identical	ASM107677v1	Draft genome in chromosome level	2015-07-10	DNA RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein

GenBank
RefSeq

Statistics of Genome Assembly

Genome size (bp)	2,088,167
Chromosomes, organellas and plasmids sequnece No.	0
Genome sequence No.	37
Scaffold sequence No.	37
Scaffold L50	7
Scaffold N50 (bp)	132,621
Scaffold N75 (bp)	66,554
Scaffold N90 (bp)	34,312
Contig sequence No.	38
Contig L50	7
Contig N50 (bp)	132,621
Unique components No.	37
No. of regions with alternate loci or patches	0
Ns gap sequence No. (bp)	1
Ns gap sequence region length (bp)	15
Gaps No. between scaffolds	0

Statistics of Genome Assembly

Genome size (bp)	2,088,167
Chromosomes, organellas and plasmids sequnece No.	0
Genome sequence No.	37
GC content	40
Scaffold sequence No.	37
Scaffold L50	7
Scaffold N50 (bp)	132,621
Scaffold N75 (bp)	66,554
Scaffold N90 (bp)	34,312
Contig sequence No.	38
Contig L50	7
Contig N50 (bp)	132,621
Unique components No.	37
No. of regions with alternate loci or patches	0
Ns gap sequence No. (bp)	1
Ns gap sequence region length (bp)	15
Gaps No. between scaffolds	0

Annotation of Whole Genome Assembly

asse

	Protein	trna	rrna	ncrna	Pseudogene	Others	Total
Total	2004	58	9	0	57	3	2131