- Scientific Name
- Streptococcus mutans
- Common Names
- -
- Bioproject
- PRJNA808899
- Biosample
- SAMN26135043
- Accession No.
- GCA_026782705.1
- RefSeq Accession No.
- GCF_026782705.1
- RefSeq vs GenBank similarity
- identical
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- Region Zealand
- Released Date
- 2023-12-02
- NCBI Released Date
- 2022-12-09
- Assembly Level
- Draft genome in scaffold level
- Genome Representation
- Full Genome
- Download
- DNA GFF RNA CDS Protein
- RefSeq Download
- RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein
- Publication(s) -
| Assembly Accession | RefSeq Accession | RefSeq vs GenBank similarity | Assembly Name | Assembly Level | NCBI Released Date | Download Files |
|---|---|---|---|---|---|---|
| GCA_026782705.1 | GCF_026782705.1 | identical | ASM2678270v1 | Draft genome in chromosome level | 2022-12-09 | DNA GFF RNA CDS Protein RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein |
Statistics of Genome Assembly
| Genome size (bp) | 2,022,536 |
| Chromosomes, organellas and plasmids sequnece No. | 0 |
| Genome sequence No. | 21 |
| GC content | 36.5 |
| Scaffold sequence No. | 21 |
| Scaffold L50 | 5 |
| Scaffold N50 (bp) | 188,241 |
| Scaffold N75 (bp) | 125,584 |
| Scaffold N90 (bp) | 66,440 |
| Contig sequence No. | 25 |
| Contig L50 | 5 |
| Contig N50 (bp) | 155,191 |
| Unique components No. | 21 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 4 |
| Ns gap sequence region length (bp) | 331 |
| Gaps No. between scaffolds | 0 |
Annotation of Whole Genome Assembly
| Protein | trna | rrna | ncrna | Pseudogene | Others | Total | |
|---|---|---|---|---|---|---|---|
| Total | 1883 | 27 | 3 | 1 | 59 | 3 | 1976 |
Statistics of Genome Assembly
| Genome size (bp) | 2,022,536 |
| Chromosomes, organellas and plasmids sequnece No. | 0 |
| Genome sequence No. | 21 |
| GC content | 36.5 |
| Scaffold sequence No. | 21 |
| Scaffold L50 | 5 |
| Scaffold N50 (bp) | 188,241 |
| Scaffold N75 (bp) | 125,584 |
| Scaffold N90 (bp) | 66,440 |
| Contig sequence No. | 25 |
| Contig L50 | 5 |
| Contig N50 (bp) | 155,191 |
| Unique components No. | 21 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 4 |
| Ns gap sequence region length (bp) | 331 |
| Gaps No. between scaffolds | 0 |
Annotation of Whole Genome Assembly
| Protein | trna | rrna | ncrna | Pseudogene | Others | Total | |
|---|---|---|---|---|---|---|---|
| Total | 1886 | 27 | 3 | asse1 | 63 | 3 | 1983 |