- Scientific Name
- Lentinula edodes
- Common Names
- shiitake mushroom; Agaricus edodes, Lentinus edodes
- Bioproject
- PRJNA310971
- Biosample
- SAMN04457462
- Accession No.
- GCA_001562095.1
- RefSeq Accession No.
- -
- RefSeq vs GenBank similarity
- -
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- Chungbuk National University
- Released Date
- 2023-11-07
- NCBI Released Date
- 2016-02-16
- Assembly Level
- Draft genome in scaffold level
- Genome Representation
- Full Genome
- Download
- DNA
- RefSeq Download
- -
- Publication(s) -
| Assembly Accession | RefSeq Accession | RefSeq vs GenBank similarity | Assembly Name | Assembly Level | NCBI Released Date | Download Files |
|---|---|---|---|---|---|---|
| GCA_001562095.1 | - | - | B17 | Draft genome in chromosome level | 2016-02-16 | DNA |
Statistics of Genome Assembly
| Genome size (bp) | 46,106,741 |
| Chromosomes, organellas and plasmids sequnece No. | 0 |
| Genome sequence No. | 31 |
| Scaffold sequence No. | 31 |
| Scaffold L50 | 5 |
| Scaffold N50 (bp) | 3,662,990 |
| Scaffold N75 (bp) | 1,678,028 |
| Scaffold N90 (bp) | 805,900 |
| Contig sequence No. | 129 |
| Contig L50 | 13 |
| Contig N50 (bp) | 858,211 |
| Unique components No. | 31 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 98 |
| Ns gap sequence region length (bp) | 196,051 |
| Gaps No. between scaffolds | 0 |