- Scientific Name
- Pyricularia oryzae
- Common Names
- rice blast fungus; Magnaporthe oryzae B.C. Couch, 2002, Magnaporthe oryzae
- Bioproject
- PRJNA391416
- Biosample
- SAMN07267887
- Accession No.
- GCA_002218355.1
- RefSeq Accession No.
- -
- RefSeq vs GenBank similarity
- -
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- huazhong agricultural university
- Released Date
- 2023-11-07
- NCBI Released Date
- 2017-07-14
- Assembly Level
- Draft genome in scaffold level
- Genome Representation
- Full Genome
- Download
- DNA
- RefSeq Download
- -
- Publication(s) -
| Assembly Accession | RefSeq Accession | RefSeq vs GenBank similarity | Assembly Name | Assembly Level | NCBI Released Date | Download Files |
|---|---|---|---|---|---|---|
| GCA_002218355.1 | - | - | H08-1c_0.9 | Draft genome in chromosome level | 2017-07-14 | DNA |
Statistics of Genome Assembly
| Genome size (bp) | 39,272,241 |
| Chromosomes, organellas and plasmids sequnece No. | 0 |
| Genome sequence No. | 2,879 |
| Scaffold sequence No. | 2,879 |
| Scaffold L50 | 67 |
| Scaffold N50 (bp) | 147,502 |
| Scaffold N75 (bp) | 42,239 |
| Scaffold N90 (bp) | 9,943 |
| Contig sequence No. | 5,290 |
| Contig L50 | 552 |
| Contig N50 (bp) | 20,801 |
| Unique components No. | 2,879 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 2,411 |
| Ns gap sequence region length (bp) | 130,883 |
| Gaps No. between scaffolds | 0 |