- Scientific Name
- Malania oleifera
- Common Names
- -
- Bioproject
- PRJNA472200
- Biosample
- SAMN09235853
- Accession No.
- GCA_029873635.1
- RefSeq Accession No.
- GCF_029873635.1
- RefSeq vs GenBank similarity
- different
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- Beijing Forestry University
- Released Date
- 2024-10-02
- NCBI Released Date
- 2023-05-15
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Download
- DNA
- RefSeq Download
- RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein
- Publication(s) -
| Assembly Accession | RefSeq Accession | RefSeq vs GenBank similarity | Assembly Name | Assembly Level | NCBI Released Date | Download Files |
|---|---|---|---|---|---|---|
| GCA_029873635.1 | GCF_029873635.1 | different | ASM2987363v1 | Draft genome in scaffold level | 2023-05-15 | DNA RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein |
Statistics of Genome Assembly
| Genome size (bp) | 1,495,100,881 |
| Chromosomes, organellas and plasmids sequnece No. | 15 |
| Genome sequence No. | 514 |
| GC content | 36 |
| Scaffold sequence No. | 514 |
| Scaffold L50 | 6 |
| Scaffold N50 (bp) | 112,642,085 |
| Scaffold N75 (bp) | 95,940,539 |
| Scaffold N90 (bp) | 88,385,804 |
| Contig sequence No. | 1,103 |
| Contig L50 | 93 |
| Contig N50 (bp) | 4,952,199 |
| Unique components No. | 514 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 589 |
| Ns gap sequence region length (bp) | 57,004 |
| Gaps No. between scaffolds | 0 |
Statistics of Genome Assembly
| Genome size (bp) | 1,494,424,960 |
| Chromosomes, organellas and plasmids sequnece No. | 13 |
| Genome sequence No. | 510 |
| GC content | 36 |
| Scaffold sequence No. | 510 |
| Scaffold L50 | 6 |
| Scaffold N50 (bp) | 112,642,085 |
| Scaffold N75 (bp) | 95,940,539 |
| Scaffold N90 (bp) | 88,385,804 |
| Contig sequence No. | 1,099 |
| Contig L50 | 93 |
| Contig N50 (bp) | 4,952,199 |
| Unique components No. | 510 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 589 |
| Ns gap sequence region length (bp) | 57,004 |
| Gaps No. between scaffolds | 0 |
Annotation of Whole Genome Assembly
| Protein | trna | rrna | ncrna | Pseudogene | Others | Total | |
|---|---|---|---|---|---|---|---|
| Total | 20699 | 395 | 212 | asse2890 | 1056 | 0 | 25252 |