- Scientific Name
- Rhododendron vialii
- Common Names
- -
- Bioproject
- PRJNA971246
- Biosample
- SAMN35028934
- Accession No.
- GCA_030253575.1
- RefSeq Accession No.
- GCF_030253575.1
- RefSeq vs GenBank similarity
- different
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- Chinese Academy of Sciences (CAS)
- Released Date
- 2024-10-02
- NCBI Released Date
- 2023-06-12
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Download
- DNA
- RefSeq Download
- RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein
- Publication(s) -
| Assembly Accession | RefSeq Accession | RefSeq vs GenBank similarity | Assembly Name | Assembly Level | NCBI Released Date | Download Files |
|---|---|---|---|---|---|---|
| GCA_030253575.1 | GCF_030253575.1 | different | ASM3025357v1 | Draft genome in scaffold level | 2023-06-12 | DNA RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein |
Statistics of Genome Assembly
| Genome size (bp) | 533,590,324 |
| Chromosomes, organellas and plasmids sequnece No. | 15 |
| Genome sequence No. | 15 |
| GC content | 39.5 |
| Scaffold sequence No. | 15 |
| Scaffold L50 | 6 |
| Scaffold N50 (bp) | 42,050,137 |
| Scaffold N75 (bp) | 36,345,595 |
| Scaffold N90 (bp) | 35,586,280 |
| Contig sequence No. | 20 |
| Contig L50 | 7 |
| Contig N50 (bp) | 35,672,969 |
| Unique components No. | 15 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 5 |
| Ns gap sequence region length (bp) | 495 |
| Gaps No. between scaffolds | 0 |
Statistics of Genome Assembly
| Genome size (bp) | 532,733,691 |
| Chromosomes, organellas and plasmids sequnece No. | 13 |
| Genome sequence No. | 13 |
| GC content | 39.5 |
| Scaffold sequence No. | 13 |
| Scaffold L50 | 6 |
| Scaffold N50 (bp) | 42,050,137 |
| Scaffold N75 (bp) | 36,345,595 |
| Scaffold N90 (bp) | 35,586,280 |
| Contig sequence No. | 18 |
| Contig L50 | 7 |
| Contig N50 (bp) | 35,672,969 |
| Unique components No. | 13 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 5 |
| Ns gap sequence region length (bp) | 495 |
| Gaps No. between scaffolds | 0 |
Annotation of Whole Genome Assembly
| Protein | trna | rrna | ncrna | Pseudogene | Others | Total | |
|---|---|---|---|---|---|---|---|
| Total | 30067 | 313 | 1443 | asse5227 | 1801 | 0 | 38851 |