- Scientific Name
- Rosa rugosa
- Common Names
- Japanese rose, Turkestan rose;
- Bioproject
- PRJEB64183
- Biosample
- SAMEA111431194
- Accession No.
- GCA_958301625.1
- RefSeq Accession No.
- -
- RefSeq vs GenBank similarity
- -
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- WELLCOME SANGER INSTITUTE
- Released Date
- 2023-10-17
- NCBI Released Date
- 2023-07-08
- Assembly Level
- Draft genome in scaffold level
- Genome Representation
- Full Genome
- Download
- DNA
- RefSeq Download
- -
- Publication(s) -
| Assembly Accession | RefSeq Accession | RefSeq vs GenBank similarity | Assembly Name | Assembly Level | NCBI Released Date | Download Files |
|---|---|---|---|---|---|---|
| GCA_958301625.1 | - | - | drRosRugo1.1 alternate haplotype | Draft genome in chromosome level | 2023-07-08 | DNA |
Statistics of Genome Assembly
| Genome size (bp) | 365,699,510 |
| Chromosomes, organellas and plasmids sequnece No. | 0 |
| Genome sequence No. | 4,436 |
| GC content | 39.5 |
| Scaffold sequence No. | 4,436 |
| Scaffold L50 | 759 |
| Scaffold N50 (bp) | 143,422 |
| Scaffold N75 (bp) | 73,565 |
| Scaffold N90 (bp) | 33,091 |
| Contig sequence No. | 4,460 |
| Contig L50 | 768 |
| Contig N50 (bp) | 141,821 |
| Unique components No. | 4,436 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 24 |
| Ns gap sequence region length (bp) | 4,800 |
| Gaps No. between scaffolds | 0 |